Rn01498851_m1 Best Coverage

• Gene Symbol: Ncoa1
• Gene Name: nuclear receptor coactivator 1
• Gene Aliases: SRC-1
• Chromosome Location: Chr.6: 28677563 - 28931843 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ncoa1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108012.1	NP_001101482.1	5 - 6	608		57
	XM_006239842.2	XP_006239904.1	2 - 3	1502		57
	XM_006239843.2	XP_006239905.1	2 - 3	734		57
	XM_006239844.2	XP_006239906.1	2 - 3	1502		57
	XM_006239845.2	XP_006239907.1	2 - 3	1502		57
	XM_006239846.2	XP_006239908.1	2 - 3	1502		57

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002061.rn.1

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Process(es)

positive regulation of transcription from RNA polymerase II promoter by galactose
transcription, DNA-templated
lactation
male gonad development
response to hormone
cerebellum development
hippocampus development
hypothalamus development
cerebral cortex development
intracellular receptor signaling pathway
response to estradiol
response to retinoic acid
response to progesterone
cellular response to hormone stimulus
positive regulation of apoptotic process
histone H4 acetylation
estrous cycle
positive regulation of neuron differentiation
positive regulation of transcription, DNA-templated
positive regulation of female receptivity
positive regulation of transcription from RNA polymerase II promoter
male mating behavior
labyrinthine layer morphogenesis
regulation of cellular response to drug
regulation of RNA biosynthetic process

Function(s)

RNA polymerase II regulatory region DNA binding
DNA binding
chromatin binding
transcription coactivator activity
histone acetyltransferase activity
signal transducer activity
transcription factor binding
ligand-dependent nuclear receptor binding
enzyme binding
estrogen receptor binding
ligand-dependent nuclear receptor transcription coactivator activity
protein complex binding
progesterone receptor binding
nuclear hormone receptor binding
retinoic acid receptor binding
retinoid X receptor binding
protein dimerization activity
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0600015148.rn.1	TC0600002061.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600015157.rn.1	TC0600002061.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600015149.rn.1	TC0600002061.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600015151.rn.1	TC0600002061.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600015154.rn.1	TC0600002061.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600015155.rn.1	TC0600002061.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600015156.rn.1	TC0600002061.rn.1	RTA TC