Rn01499419_m1 Best Coverage

• Gene Symbol: Chfr
• Gene Name: checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase
• Gene Aliases: -
• Chromosome Location: Chr.12: 52562594 - 52596155 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chfr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001009258.1	NP_001009258.1	16 - 17	1928		64
	XM_006249535.2	XP_006249597.1	16 - 17	2010		64
	XM_006249536.2	XP_006249598.1	15 - 16	1890		64
GenBank mRNA	BC087162.1	-	16 - 17	1928	7135077	64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001875.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chfr

Panther Classification:

Molecular Function -

ubiquitin-protein ligase, protein modifying enzyme

Gene Ontology Categories:

Process(es)

protein polyubiquitination
mitotic cell cycle
ubiquitin-dependent protein catabolic process
mitotic cell cycle checkpoint
protein ubiquitination
modification-dependent protein catabolic process
positive regulation of protein ubiquitination
protein destabilization
positive regulation of proteasomal ubiquitin-dependent protein catabolic process

Function(s)

nucleotide binding
ubiquitin-protein transferase activity
zinc ion binding
ubiquitin protein ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P023689	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	540372	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	828339	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	168178	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	469377	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	318759	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	304347	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	778866	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	588463	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	859982	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	75	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	365499	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	424852	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	569933	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	907298	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	795572	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	547106	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	879341	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	796872	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	456400	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	885195	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	646337	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	86414	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	334974	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	83214	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	457234	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	485193	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	54423	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	140476	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	162958	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	57879	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P023689	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P023689	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P023689	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P449969	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1046651	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	6563	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	42193	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	11517	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10763123	-	-
Affymetrix Rat Gene 1.0 ST Array	10763118	-	-
Affymetrix Rat Gene 1.0 ST Array	10763129	-	-
Affymetrix Rat Gene 1.0 ST Array	10763120	-	-
Affymetrix Rat Gene 1.0 ST Array	10763122	-	-
Affymetrix Rat Gene 1.0 ST Array	10763128	-	-
Affymetrix Rat Gene 1.0 ST Array	10763117	-	-
Affymetrix Rat Gene 1.0 ST Array	10763124	-	-
Affymetrix Rat Gene 1.0 ST Array	10763121	-	-
Affymetrix Rat Gene 1.0 ST Array	10763130	-	-
Affymetrix Rat Gene 1.0 ST Array	10763133	-	-
Affymetrix Rat Gene 1.0 ST Array	10763131	-	-
Affymetrix Rat Gene 1.0 ST Array	10763134	-	-
Affymetrix Rat Gene 1.0 ST Array	10763125	-	-
Affymetrix Rat Gene 1.0 ST Array	10763126	-	-
Affymetrix Rat Gene 1.0 ST Array	10763127	-	-
Affymetrix Rat Gene 1.0 ST Array	10763132	-	-
Affymetrix Rat Gene 1.0 ST Array	10763119	-	-
Affymetrix Rat Gene 1.1 ST Array	10763116	-	-
Rat Genome 230 2.0 Array	1383313_PM_at	-	-
Rat Genome 230 2.0 Array	1383313_at	-	-
Rat Genome 230 2.0 Array	1393293_at	-	-
Rat Genome 230 2.0 Array	1393293_PM_at	-	-
Affymetrix HT Rat Focus Array	1393293_PM_at	-	-
Affymetrix HT Rat Focus Array	1393293_at	-	-
Affymetrix HT Rat Focus Array	1383313_at	-	-
Affymetrix HT Rat Focus Array	1383313_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200015991.rn.1	TC1200001875.rn.1	RTA TC
Rat Expression Set 230	1393293_PM_at	-	-
Rat Expression Set 230	1383313_PM_at	-	-
Rat Expression Set 230	1383313_at	-	-
Rat Expression Set 230	1393293_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10763116	-	-
Rat Genome U34 Set	rc_AA925391_at	-	-
Rat Genome U34 Set	rc_AI029628_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20788923	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1364233	-	-
RatRef-12 Expression BeadChip	ILMN_57717	-	-