Rn01501403_m1 Best Coverage

• Gene Symbol: Fxn
• Gene Name: frataxin
• Gene Aliases: RGD1565754
• Chromosome Location: Chr.1: 242123975 - 242153168 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Fxn
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191952.1	NP_001178881.1	2 - 3	256		122
	XM_008760308.1	XP_008758530.1	2 - 3	590		122

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100007440.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

transfer/carrier protein

Gene Ontology Categories:

Process(es)

oxidative phosphorylation
heme biosynthetic process
ion transport
cellular iron ion homeostasis
mitochondrion organization
adult walking behavior
positive regulation of cell proliferation
aerobic respiration
embryo development ending in birth or egg hatching
response to iron ion
regulation of ferrochelatase activity
response to organic cyclic compound
iron-sulfur cluster assembly
protein autoprocessing
iron incorporation into metallo-sulfur cluster
proprioception
positive regulation of cell growth
negative regulation of multicellular organism growth
response to drug
negative regulation of apoptotic process
positive regulation of catalytic activity
positive regulation of axon extension
negative regulation of organ growth
positive regulation of transferase activity
positive regulation of lyase activity
positive regulation of oxidoreductase activity
oxidation-reduction process
cellular response to hydrogen peroxide
negative regulation of release of cytochrome c from mitochondria

Function(s)

ferroxidase activity
ferrous iron binding
ferric iron binding
metallochaperone activity
enzyme binding
iron chaperone activity
iron-sulfur cluster binding
2 iron, 2 sulfur cluster binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0100060091.rn.1	TC0100007440.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100060092.rn.1	TC0100007440.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100060089.rn.1	TC0100007440.rn.1	RTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21249323	-	-