Rn01503631_m1 Best Coverage

• Gene Symbol: Scyl2
• Gene Name: SCY1-like 2 (S. cerevisiae)
• Gene Aliases: RGD1305665
• Chromosome Location: Chr.7: 30291085 - 30344463 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Scyl2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191780.1	NP_001178709.1	17 - 18	2397		79
	XM_006241241.2	XP_006241303.1	18 - 19	2446		79
	XM_006241242.2	XP_006241304.1	18 - 19	2443		79

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002448.rn.1

• Set Membership: Amplicon length between 71 and 85, Protein Kinase, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

positive regulation of receptor internalization
protein phosphorylation
endosome to lysosome transport
negative regulation of canonical Wnt signaling pathway
receptor internalization involved in canonical Wnt signaling pathway
positive regulation of clathrin-mediated endocytosis

Function(s)

protein kinase activity
receptor binding
ATP binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P142066	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P142066	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P142066	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P142066	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P166464	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P275059	-	-

Array Name	Probe IDs	Targets	Target Type
Rat Genome 230 2.0 Array	1396581_at	-	-
Rat Genome 230 2.0 Array	1373825_PM_at	-	-
Rat Genome 230 2.0 Array	1373825_at	-	-
Rat Genome 230 2.0 Array	1396581_PM_at	-	-
Affymetrix HT Rat Focus Array	1396581_at	-	-
Affymetrix HT Rat Focus Array	1373825_at	-	-
Affymetrix HT Rat Focus Array	1396581_PM_at	-	-
Affymetrix HT Rat Focus Array	1373825_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700019557.rn.1	TC0700002448.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700019560.rn.1	TC0700002448.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700019559.rn.1	TC0700002448.rn.1	RTA TC
Rat Expression Set 230	1373825_at	-	-
Rat Expression Set 230	1373825_PM_at	-	-
Rat Expression Set 230	1396581_at	-	-
Rat Expression Set 230	1396581_PM_at	-	-
Rat Genome U34 Set	rc_AI169576_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22076632	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1354135	-	-
RatRef-12 Expression BeadChip	ILMN_70383	-	-