Rn01512769_m1 Best Coverage

• Gene Symbol: Caprin1
• Gene Name: cell cycle associated protein 1
• Gene Aliases: GPI p137, Gpiap1, rng105
• Chromosome Location: Chr.3: 93701830 - 93789580 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Caprin1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001012185.2	NP_001012185.2	7 - 8	903		72
	XM_006234652.2	XP_006234714.1	8 - 9	958		72
GenBank mRNA	AB373991.1	-	6 - 7	818		72
	AY155572.1	-	6 - 7	759		72
	BC087123.1	-	6 - 7	773		72

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300003773.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Caprin1

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of translation
positive regulation of dendrite morphogenesis
positive regulation of dendritic spine morphogenesis

Function(s)

RNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P042117	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P817539	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	536040	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	534952	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	410353	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	568857	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	251825	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	628907	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	844347	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	966065	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	289681	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	586459	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	651539	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	850191	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	67324	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	304124	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	441424	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	697206	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	379708	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	812205	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	822972	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	88578	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	954442	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	70141	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	173918	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	51166	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P817539	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P042117	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P817539	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P042117	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P042117	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P817539	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1027438	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P10962	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P817539	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	64071	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	58989	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	4071	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10847860	-	-
Affymetrix Rat Gene 1.0 ST Array	10847868	-	-
Affymetrix Rat Gene 1.0 ST Array	10847861	-	-
Affymetrix Rat Gene 1.0 ST Array	10847866	-	-
Affymetrix Rat Gene 1.0 ST Array	10847869	-	-
Affymetrix Rat Gene 1.0 ST Array	10847865	-	-
Affymetrix Rat Gene 1.0 ST Array	10847864	-	-
Affymetrix Rat Gene 1.0 ST Array	10847858	-	-
Affymetrix Rat Gene 1.0 ST Array	10847856	-	-
Affymetrix Rat Gene 1.0 ST Array	10847862	-	-
Affymetrix Rat Gene 1.0 ST Array	10847863	-	-
Affymetrix Rat Gene 1.0 ST Array	10847857	-	-
Affymetrix Rat Gene 1.0 ST Array	10847855	-	-
Affymetrix Rat Gene 1.0 ST Array	10847867	-	-
Affymetrix Rat Gene 1.1 ST Array	10847854	-	-
Rat Genome 230 2.0 Array	1395412_PM_at	-	-
Rat Genome 230 2.0 Array	1395173_PM_at	-	-
Rat Genome 230 2.0 Array	1395173_at	-	-
Rat Genome 230 2.0 Array	1395412_at	-	-
Rat Genome 230 2.0 Array	1371938_PM_at	-	-
Rat Genome 230 2.0 Array	1371938_at	-	-
Rat Genome 230 2.0 Array	1371939_PM_at	-	-
Rat Genome 230 2.0 Array	1371939_at	-	-
Affymetrix HT Rat Focus Array	1395173_at	-	-
Affymetrix HT Rat Focus Array	1395173_PM_at	-	-
Affymetrix HT Rat Focus Array	1371939_PM_at	-	-
Affymetrix HT Rat Focus Array	1371939_at	-	-
Affymetrix HT Rat Focus Array	1380358_PM_at	-	-
Affymetrix HT Rat Focus Array	1380358_at	-	-
Affymetrix HT Rat Focus Array	1395412_PM_at	-	-
Affymetrix HT Rat Focus Array	1395412_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300028757.rn.1	TC0300003773.rn.1	RTA TC
Rat Expression Set 230	1371939_PM_at	-	-
Rat Expression Set 230	1371938_at	-	-
Rat Expression Set 230	1371939_at	-	-
Rat Expression Set 230	1371938_PM_at	-	-
Rat Expression Set 230	1395173_PM_at	-	-
Rat Expression Set 230	1395173_at	-	-
Rat Expression Set 230	1395412_PM_at	-	-
Rat Expression Set 230	1395412_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10847854	-	-
Rat Genome U34 Set	rc_AI008787_at	-	-
Rat Genome U34 Set	rc_AI171369_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21922542	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376498	-	-