Rn01523660_g1 Best Coverage

• Gene Symbol: Chi3l3
• Gene Name: chitinase 3-like 3
• Gene Aliases: Chi3l4, Chil3, rYM1olf
• Chromosome Location: Chr.2: 208900120 - 208936858 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chi3l3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191712.1	NP_001178641.1	4 - 5	316		63
	XM_008761383.1	XP_008759605.1	4 - 5	316		63
GenBank mRNA	JF781276.1	-	4 - 5	334		63

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001943.rn.1

• Set Membership: Amplicon length less than or equal to 70, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

glycosidase

Gene Ontology Categories:

Process(es)

carbohydrate metabolic process
chitin catabolic process
immune response

Function(s)

chitinase activity
chitin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P003674	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P003674	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P003674	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P003674	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P349427	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0200013362.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013363.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013364.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013365.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013371.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013366.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013370.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013372.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013373.rn.1	TC0200001943.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013367.rn.1	TC0200001943.rn.1	RTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21295398	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366656	-	-
RatRef-12 Expression BeadChip	ILMN_48698	-	-