Rn01528054_m1 Best Coverage

• Gene Symbol: Zscan21
• Gene Name: zinc finger and SCAN domain containing 21
• Gene Aliases: Zipro1
• Chromosome Location: Chr.12: 19262829 - 19277913 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Zscan21
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001012021.2	NP_001012021.1	3 - 4	986		61
	XM_006249007.2	XP_006249069.1	3 - 4	1115		61
GenBank mRNA	BC079435.1	-	3 - 4	934	7115285	61

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000328.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Zscan21

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P051681	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	915698	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	772011	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	782331	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	458483	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	270840	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	477388	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	629546	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	172732	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	252133	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	937858	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	606598	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	854619	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	102400	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	156878	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	179083	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P051681	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P051681	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P051681	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P156609	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	68479	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	34572	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10757210	-	-
Affymetrix Rat Gene 1.0 ST Array	10757209	-	-
Affymetrix Rat Gene 1.0 ST Array	10757208	-	-
Affymetrix Rat Gene 1.0 ST Array	10757207	-	-
Affymetrix Rat Gene 1.1 ST Array	10757206	-	-
Rat Genome 230 2.0 Array	1384282_at	-	-
Rat Genome 230 2.0 Array	1384282_PM_at	-	-
Affymetrix HT Rat Focus Array	1384282_PM_at	-	-
Affymetrix HT Rat Focus Array	1384282_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200002617.rn.1	TC1200000328.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200002621.rn.1	TC1200000328.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200002620.rn.1	TC1200000328.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200002616.rn.1	TC1200000328.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200002618.rn.1	TC1200000328.rn.1	RTA TC
Rat Expression Set 230	1384282_at	-	-
Rat Expression Set 230	1384282_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10757206	-	-
Rat Genome U34 Set	rc_AI030812_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21909111	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376345	-	-