Rn01530347_g1

• Gene Symbol: Trim13
• Gene Name: tripartite motif-containing 13
• Gene Aliases: -
• Chromosome Location: Chr.15: 41927180 - 41936529 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Trim13
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001012210.1	NP_001012210.1	2 - 3	119		137
	XM_006252137.2	XP_006252199.1	2 - 3	206		137
GenBank mRNA	BC088425.1	-	2 - 3	119	7123847	137

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.
This assay is in the 5'UTR region of the BC088425.1,NM_001012210.1,XM_006252137.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Trim13

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

signal transduction
response to gamma radiation
positive regulation of cell death
positive regulation of macroautophagy
ER-associated ubiquitin-dependent protein catabolic process
negative regulation of viral transcription
positive regulation of I-kappaB kinase/NF-kappaB signaling
proteasome-mediated ubiquitin-dependent protein catabolic process
innate immune response
positive regulation of NF-kappaB transcription factor activity
protein autoubiquitination
negative regulation of viral release from host cell

Function(s)

ubiquitin-protein transferase activity
signal transducer activity
zinc ion binding
ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P109977	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	629242	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	700997	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	204848	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	765961	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	259842	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	357400	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	22326	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P109977	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P109977	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P109977	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P109977	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	92011	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	76323	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10780929	-	-
Affymetrix Rat Gene 1.0 ST Array	10780930	-	-
Affymetrix Rat Gene 1.1 ST Array	10780924	-	-
Affymetrix Rat Clariom S Assay	PSR1500004391.rn.1	TC1500000626.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500004392.rn.1	TC1500000626.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10780924	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22155216	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376444	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376030	-	-