Rn01532113_m1 Best Coverage

• Gene Symbol: RT1-T24-4
• Gene Name: RT1 class I, locus T24, gene 4
• Gene Aliases: H2-T24, RT1-149
• Chromosome Location: Chr.20: 3189457 - 3197457 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: RT1-T24-4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001008826.3	NP_001008826.2	2 - 3	429		70
GenBank mRNA	BC098866.1	-	2 - 3	384	7380738	70
	FQ213879.1	-	2 - 3	402		70
	FQ225259.1	-	2 - 3	402		70
	FQ225970.1	-	2 - 3	413		70
	FQ233711.1	-	2 - 3	404		70

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000090.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene RT1-T24-4

Panther Classification:

Molecular Function -

major histocompatibility complex protein

Gene Ontology Categories:

Process(es)

positive regulation of T cell mediated cytotoxicity
antigen processing and presentation of peptide antigen via MHC class I
immune response

Function(s)

receptor binding
peptide antigen binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P156436	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P156436	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P156436	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P156436	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10827825	-	-
Affymetrix Rat Gene 1.0 ST Array	10827834	-	-
Affymetrix Rat Gene 1.0 ST Array	10827826	-	-
Affymetrix Rat Gene 1.0 ST Array	10827822	-	-
Affymetrix Rat Gene 1.0 ST Array	10827821	-	-
Affymetrix Rat Gene 1.0 ST Array	10827824	-	-
Affymetrix Rat Gene 1.0 ST Array	10827827	-	-
Affymetrix Rat Gene 1.0 ST Array	10827823	-	-
Affymetrix Rat Gene 1.1 ST Array	10827833	-	-
Affymetrix Rat Gene 1.1 ST Array	10827820	-	-
Rat Genome 230 2.0 Array	1381029_at	-	-
Rat Genome 230 2.0 Array	1388213_PM_a_at	-	-
Rat Genome 230 2.0 Array	1388203_x_at	-	-
Rat Genome 230 2.0 Array	1388212_a_at	-	-
Rat Genome 230 2.0 Array	1388694_at	-	-
Rat Genome 230 2.0 Array	1371123_PM_x_at	-	-
Rat Genome 230 2.0 Array	1389734_x_at	-	-
Rat Genome 230 2.0 Array	1388212_PM_a_at	-	-
Rat Genome 230 2.0 Array	1381029_PM_at	-	-
Rat Genome 230 2.0 Array	1371123_x_at	-	-
Rat Genome 230 2.0 Array	1388203_PM_x_at	-	-
Rat Genome 230 2.0 Array	1388213_a_at	-	-
Rat Genome 230 2.0 Array	1388694_PM_at	-	-
Rat Genome 230 2.0 Array	1389734_PM_x_at	-	-
Affymetrix HT Rat Focus Array	1389734_PM_x_at	-	-
Affymetrix HT Rat Focus Array	1389734_x_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000000518.rn.1	TC2000000090.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000000517.rn.1	TC2000000090.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000000509.rn.1	TC2000000090.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000000516.rn.1	TC2000000090.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000000512.rn.1	TC2000000090.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000000519.rn.1	TC2000000090.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000000511.rn.1	TC2000000090.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000000510.rn.1	TC2000000090.rn.1	RTA TC
Rat Expression Set 230	1388203_PM_x_at	-	-
Rat Expression Set 230	1388694_PM_at	-	-
Rat Expression Set 230	1388694_at	-	-
Rat Expression Set 230	1389734_x_at	-	-
Rat Expression Set 230	1389734_PM_x_at	-	-
Rat Expression Set 230	1388203_x_at	-	-
Rat Expression Set 230	1388212_a_at	-	-
Rat Expression Set 230	1371123_PM_x_at	-	-
Rat Expression Set 230	1388213_a_at	-	-
Rat Expression Set 230	1388213_PM_a_at	-	-
Rat Expression Set 230	1388212_PM_a_at	-	-
Rat Expression Set 230	1371123_x_at	-	-
Rat Expression Set 230	1381029_PM_at	-	-
Rat Expression Set 230	1381029_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10827833	-	-
Affymetrix Rat Gene 1.0 ST Array	10827820	-	-
Rat Genome U34 Set	rc_AI235890_s_at	-	-
Rat Genome U34 Set	rc_AI103500_f_at	-	-
Rat Genome U34 Set	rc_AI176358_f_at	-	-
Rat Genome U34 Set	rc_AI103500_i_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22373629	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352269	-	-