Rn01535992_m1 Best Coverage

• Gene Symbol: Snta1
• Gene Name: syntrophin, alpha 1
• Gene Aliases: -
• Chromosome Location: Chr.3: 149874023 - 149905983 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Snta1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100901.1	NP_001094371.1	3 - 4	790		84
	XM_006235326.2	XP_006235388.1	3 - 4	829		84
GenBank mRNA	BC100086.1	-	1 - 2	86		84
	BC169101.1	-	3 - 4	790	5599966	84

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300004522.rn.1

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

regulation of heart rate
regulation of vasoconstriction by circulating norepinephrine
neuromuscular junction development
biological_process
regulation of ventricular cardiac muscle cell membrane repolarization
ventricular cardiac muscle cell action potential
negative regulation of peptidyl-cysteine S-nitrosylation
regulation of sodium ion transmembrane transport

Function(s)

protein binding
sodium channel regulator activity
PDZ domain binding
ion channel binding
nitric-oxide synthase binding
ATPase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0300034630.rn.1	TC0300004522.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300034631.rn.1	TC0300004522.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300034632.rn.1	TC0300004522.rn.1	RTA TC