Rn01536058_m1 Best Coverage

• Gene Symbol: Hm13
• Gene Name: histocompatibility minor 13
• Gene Aliases: H13
• Chromosome Location: Chr.3: 148150695 - 148189623 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hm13
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107789.1	NP_001101259.1	8 - 9	922		61
	XM_006235268.1	XP_006235330.1	8 - 9	933		61
	XM_006235269.1	XP_006235331.1	8 - 9	933		61
	XM_008762330.1	XP_008760552.1	8 - 9	933		61
GenBank mRNA	FQ218565.1	-	1 - 2	83		61
	FQ220534.1	-	1 - 2	83		61
	FQ231155.1	-	1 - 2	83		61

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002042.rn.1

• Set Membership: Amplicon length less than or equal to 70, Protease, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

aspartic protease

Gene Ontology Categories:

Process(es)

membrane protein ectodomain proteolysis
membrane protein intracellular domain proteolysis
membrane protein proteolysis

Function(s)

peptidase activity
ubiquitin protein ligase binding
aspartic endopeptidase activity, intramembrane cleaving
protein homodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0300014595.rn.1	TC0300002042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300014597.rn.1	TC0300002042.rn.1	RTA TC