Rn01536668_m1 Best Coverage

• Gene Symbol: Nudt21
• Gene Name: nudix (nucleoside diphosphate linked moiety X)-type motif 21
• Gene Aliases: Cpsf5
• Chromosome Location: Chr.19: 11450766 - 11470637 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nudt21
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001039004.1	NP_001034093.1	5 - 6	633		98
	XM_006255132.2	XP_006255194.1	5 - 6	1266		98
GenBank mRNA	BC098748.1	-	5 - 6	633	7365565	98
	BC168149.1	-	5 - 6	1272	7457021	98
	FQ229498.1	-	5 - 6	674		98

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1900000109.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

mRNA polyadenylation
mRNA processing
biological_process
protein tetramerization

Function(s)

molecular_function
RNA binding
mRNA binding
hydrolase activity
AU-rich element binding
protein homodimerization activity
histone deacetylase binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P383249	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	825724	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	48725	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	893262	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	788864	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	663093	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	845964	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	472586	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	259946	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	749997	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	563127	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	133726	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P383249	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P383249	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P383249	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P992404	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	38893	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	99547	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10806037	-	-
Affymetrix Rat Gene 1.0 ST Array	10806036	-	-
Affymetrix Rat Gene 1.0 ST Array	10806038	-	-
Affymetrix Rat Gene 1.0 ST Array	10806035	-	-
Affymetrix Rat Gene 1.0 ST Array	10806041	-	-
Affymetrix Rat Gene 1.0 ST Array	10806040	-	-
Affymetrix Rat Gene 1.0 ST Array	10806039	-	-
Affymetrix Rat Gene 1.1 ST Array	10806034	-	-
Rat Genome 230 2.0 Array	1397288_PM_at	-	-
Rat Genome 230 2.0 Array	1398356_at	-	-
Rat Genome 230 2.0 Array	1398356_PM_at	-	-
Rat Genome 230 2.0 Array	1397288_at	-	-
Affymetrix HT Rat Focus Array	1398356_PM_at	-	-
Affymetrix HT Rat Focus Array	1398356_at	-	-
Affymetrix Rat Clariom S Assay	PSR1900000945.rn.1	TC1900000109.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900000947.rn.1	TC1900000109.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900000948.rn.1	TC1900000109.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900000942.rn.1	TC1900000109.rn.1	RTA TC
Rat Expression Set 230	1398356_at	-	-
Rat Expression Set 230	1398356_PM_at	-	-
Rat Expression Set 230	1397288_at	-	-
Rat Expression Set 230	1397288_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10806034	-	-
Rat Genome U34 Set	rc_AI231776_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21327891	-	-
ABI Rat Genome Survey Microarray	22111856	-	-