Rn01640049_m1 Best Coverage

• Gene Symbol: Myd88
• Gene Name: myeloid differentiation primary response 88
• Gene Aliases: -
• Chromosome Location: Chr.8: 128022512 - 128027461 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Myd88
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_198130.1	NP_937763.1	1 - 2	416		88
	XM_006244087.2	XP_006244149.1	2 - 3	763		88
GenBank mRNA	AY191270.1	-	1 - 2	416		88
	BC097266.1	-	1 - 2	356	7459961	88

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800003545.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Myd88

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

response to molecule of fungal origin
MyD88-dependent toll-like receptor signaling pathway
inflammatory response
cell surface receptor signaling pathway
JNK cascade
Toll signaling pathway
response to virus
immunoglobulin mediated immune response
cytokine-mediated signaling pathway
lipopolysaccharide-mediated signaling pathway
response to peptidoglycan
response to lipopolysaccharide
positive regulation of interleukin-17 production
positive regulation of interleukin-23 production
positive regulation of interleukin-6 production
positive regulation of tumor necrosis factor production
regulation of cell proliferation
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of growth of symbiont in host
positive regulation of chemokine biosynthetic process
innate immune response
type I interferon biosynthetic process
positive regulation of JNK cascade
positive regulation of smooth muscle cell proliferation
positive regulation of lymphocyte proliferation
regulation of inflammatory response
defense response to Gram-positive bacterium
positive regulation of NF-kappaB transcription factor activity
response to interleukin-1
3'-UTR-mediated mRNA stabilization
cellular response to mechanical stimulus
establishment of endothelial intestinal barrier

Function(s)

receptor binding
Toll binding
interleukin-1 receptor binding
protein binding
identical protein binding
TIR domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0800028843.rn.1	TC0800003545.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800028841.rn.1	TC0800003545.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800028842.rn.1	TC0800003545.rn.1	RTA TC