Rn01642708_m1 Best Coverage

• Gene Symbol: Ddx39a
• Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A
• Gene Aliases: Ddx39, Ddxl
• Chromosome Location: Chr.19: 24846535 - 24854886 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ddx39a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053563.2	NP_446015.2	5 - 6	915		127
	XM_006255314.2	XP_006255376.1	5 - 6	815		127
GenBank mRNA	AF063447.1	-	5 - 6	711		127
	BC086328.1	-	5 - 6	915	7132938	127

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1900000305.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ddx39a

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
mRNA export from nucleus

Function(s)

helicase activity
ATP binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1900002290.rn.1	TC1900000305.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900002293.rn.1	TC1900000305.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900002289.rn.1	TC1900000305.rn.1	RTA TC