Rn01747164_m1 Best Coverage

• Gene Symbol: Sestd1
• Gene Name: SEC14 and spectrin domains 1
• Gene Aliases: RGD1562244
• Chromosome Location: Chr.3: 64044111 - 64134977 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sestd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001134514.2	NP_001127986.2	17 - 18	2041		67
	XM_006234402.2	XP_006234464.1	18 - 19	2321		67
	XM_006234404.2	XP_006234466.1	17 - 18	2231		67
	XM_008761892.1	XP_008760114.1	18 - 19	2247		67
	XM_008761893.1	XP_008760115.1	17 - 18	2157		67
GenBank mRNA	BC169110.1	-	17 - 18	2041	7445081	67

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300003380.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Function(s)

phosphatidylserine binding
1-phosphatidylinositol binding
phosphatidylinositol-4,5-bisphosphate binding
phosphatidylinositol-5-phosphate binding
phosphatidylcholine binding
phosphatidylinositol-3-phosphate binding
phosphatidylinositol-3,4-bisphosphate binding
phosphatidylinositol-4-phosphate binding
phosphatidic acid binding
phosphatidylinositol-3,5-bisphosphate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P467956	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	861824	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	83418	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	5403	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P467956	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P467956	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P467956	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P450214	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P467956	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10846644	-	-
Affymetrix Rat Gene 1.0 ST Array	10846634	-	-
Affymetrix Rat Gene 1.0 ST Array	10846632	-	-
Affymetrix Rat Gene 1.0 ST Array	10846645	-	-
Affymetrix Rat Gene 1.0 ST Array	10846641	-	-
Affymetrix Rat Gene 1.0 ST Array	10846639	-	-
Affymetrix Rat Gene 1.0 ST Array	10846647	-	-
Affymetrix Rat Gene 1.0 ST Array	10846637	-	-
Affymetrix Rat Gene 1.0 ST Array	10846635	-	-
Affymetrix Rat Gene 1.0 ST Array	10846642	-	-
Affymetrix Rat Gene 1.0 ST Array	10846646	-	-
Affymetrix Rat Gene 1.0 ST Array	10846640	-	-
Affymetrix Rat Gene 1.0 ST Array	10846648	-	-
Affymetrix Rat Gene 1.0 ST Array	10846638	-	-
Affymetrix Rat Gene 1.0 ST Array	10846633	-	-
Affymetrix Rat Gene 1.0 ST Array	10846643	-	-
Affymetrix Rat Gene 1.0 ST Array	10846636	-	-
Affymetrix Rat Gene 1.1 ST Array	10846631	-	-
Rat Genome 230 2.0 Array	1388991_PM_at	-	-
Rat Genome 230 2.0 Array	1388991_at	-	-
Affymetrix HT Rat Focus Array	1388991_at	-	-
Affymetrix HT Rat Focus Array	1388991_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300026578.rn.1	TC0300003380.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300026579.rn.1	TC0300003380.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300026580.rn.1	TC0300003380.rn.1	RTA TC
Rat Expression Set 230	1388991_PM_at	-	-
Rat Expression Set 230	1388991_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10846631	-	-
Rat Genome U34 Set	rc_AA946394_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20966039	-	-
ABI Rat Genome Survey Microarray	22097295	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1349091	-	-