Rn01753200_m1 Best Coverage

• Gene Symbol: Spidr
• Gene Name: scaffolding protein involved in DNA repair
• Gene Aliases: RGD1566036
• Chromosome Location: Chr.11: 89009931 - 89260356 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Spidr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100988.1	NP_001094458.1	8 - 9	1224		60
	XM_008768898.1	XP_008767120.1	9 - 10	1420		60
	XM_008768899.1	XP_008767121.1	9 - 10	1420		60
GenBank mRNA	BC129120.1	-	8 - 9	1224	7123928	60

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1100002034.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

double-strand break repair via homologous recombination
cellular response to DNA damage stimulus
regulation of double-strand break repair via homologous recombination
positive regulation of protein complex assembly
regulation of establishment of protein localization to chromosome
cellular response to ionizing radiation
cellular response to hydroxyurea
cellular response to camptothecin
positive regulation of double-strand break repair

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1100013498.rn.1	TC1100002034.rn.1	RTA TC