Rn01753308_m1 Best Coverage

• Gene Symbol: Rb1
• Gene Name: retinoblastoma 1
• Gene Aliases: -
• Chromosome Location: Chr.15: 55081582 - 55209060 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rb1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017045.1	NP_058741.1	16 - 17	1847		80
GenBank mRNA	D25233.1	-	16 - 17	1608		80

More Information

• Set Membership: Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

G1/S transition of mitotic cell cycle
negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
negative regulation of protein kinase activity
cell cycle arrest
Ras protein signal transduction
spermatogenesis
regulation of mitotic cell cycle
negative regulation of cell proliferation
chromatin modification
neuron differentiation
sister chromatid biorientation
neuron projection development
maintenance of mitotic sister chromatid cohesion
glial cell apoptotic process
skeletal muscle cell differentiation
neuron maturation
negative regulation of apoptotic process
enucleate erythrocyte differentiation
regulation of lipid kinase activity
myoblast differentiation
positive regulation of macrophage differentiation
negative regulation of cell cycle
positive regulation of mitotic metaphase/anaphase transition
negative regulation of smoothened signaling pathway
negative regulation of transcription, DNA-templated
negative regulation of mitotic cell cycle
positive regulation of transcription from RNA polymerase II promoter
digestive tract development
cell morphogenesis involved in neuron differentiation
negative regulation of epithelial cell proliferation
striated muscle cell differentiation
cell division
neuron apoptotic process
regulation of cell cycle
protein localization to chromosome, centromeric region
cellular response to xenobiotic stimulus
regulation of cohesin loading
negative regulation of transcription involved in G1/S transition of mitotic cell cycle
hepatocyte apoptotic process
negative regulation of G1/S transition of mitotic cell cycle

Function(s)

core promoter binding
RNA polymerase II activating transcription factor binding
DNA binding
protein binding
transcription factor binding
enzyme binding
kinase binding
ubiquitin protein ligase binding
identical protein binding
phosphoprotein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P229079	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P229079	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P229079	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P229079	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P229079	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P328397	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700287464	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	94980	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	62564	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	71721	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37071	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	90966	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	86473	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	18449	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	4274	-	-
Agilent Rat cDNA Microarray (G4105A)	700287464	-	-
Agilent Rat cDNA Microarray (G4105A)	701029985	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10785231	-	-
Affymetrix Rat Gene 1.0 ST Array	10785220	-	-
Affymetrix Rat Gene 1.0 ST Array	10785229	-	-
Affymetrix Rat Gene 1.0 ST Array	10785230	-	-
Affymetrix Rat Gene 1.0 ST Array	10785218	-	-
Affymetrix Rat Gene 1.0 ST Array	10785227	-	-
Affymetrix Rat Gene 1.0 ST Array	10785222	-	-
Affymetrix Rat Gene 1.0 ST Array	10785225	-	-
Affymetrix Rat Gene 1.0 ST Array	10785232	-	-
Affymetrix Rat Gene 1.0 ST Array	10785233	-	-
Affymetrix Rat Gene 1.0 ST Array	10785217	-	-
Affymetrix Rat Gene 1.0 ST Array	10785238	-	-
Affymetrix Rat Gene 1.0 ST Array	10785243	-	-
Affymetrix Rat Gene 1.0 ST Array	10785241	-	-
Affymetrix Rat Gene 1.0 ST Array	10785226	-	-
Affymetrix Rat Gene 1.0 ST Array	10785242	-	-
Affymetrix Rat Gene 1.0 ST Array	10785228	-	-
Affymetrix Rat Gene 1.0 ST Array	10785224	-	-
Affymetrix Rat Gene 1.0 ST Array	10785223	-	-
Affymetrix Rat Gene 1.0 ST Array	10785234	-	-
Affymetrix Rat Gene 1.0 ST Array	10785236	-	-
Affymetrix Rat Gene 1.0 ST Array	10785237	-	-
Affymetrix Rat Gene 1.0 ST Array	10785235	-	-
Affymetrix Rat Gene 1.0 ST Array	10785219	-	-
Affymetrix Rat Gene 1.0 ST Array	10785239	-	-
Affymetrix Rat Gene 1.0 ST Array	10785240	-	-
Affymetrix Rat Gene 1.1 ST Array	10785216	-	-
Rat Genome 230 2.0 Array	1388185_at	-	-
Rat Genome 230 2.0 Array	1388185_PM_at	-	-
Affymetrix HT Rat Focus Array	1388185_PM_at	-	-
Affymetrix HT Rat Focus Array	1388185_at	-	-
Rat Expression Set 230	1388185_PM_at	-	-
Rat Expression Set 230	1388185_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10785216	-	-
Rat Genome U34 Set	D25233cds_at	-	-
Rat Genome U34 Set	rc_AI178012_at	-	-
Rat Genome U34 Set	D25233UTR#1_g_at	-	-
Rat Genome U34 Set	D25233UTR#1_at	-	-
Rat Genome U34 Set	rc_AI071681_f_at	-	-
Rat Genome U34 Set	D25233UTR#1_g_at	-	-
Rat Genome U34 Set	D25233cds_at	-	-
Rat Genome U34 Set	D25233UTR#1_at	-	-
Rat Genome U34 Set	D25233UTR#1_at	-	-
Rat Genome U34 Set	D25233UTR#1_g_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21157661	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1371917	-	-