Rn01755532_m1 Best Coverage

• Gene Symbol: Rbbp8
• Gene Name: retinoblastoma binding protein 8
• Gene Aliases: CtIP, RBBP-8, RGD1308872, RIM, SAE2
• Chromosome Location: Chr.18: 3134625 - 3227702 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rbbp8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001134417.1	NP_001127889.1	9 - 10	1076		69
	XM_006254407.1	XP_006254469.1	9 - 10	1220		69
	XM_006254408.2	XP_006254470.1	9 - 10	1242		69
	XM_008771938.1	XP_008770160.1	9 - 10	1299		69
	XM_008771939.1	XP_008770161.1	9 - 10	1145		69
	XM_008771940.1	XP_008770162.1	9 - 10	1121		69
	XM_008771941.1	XP_008770163.1	9 - 10	1197		69
	XM_008771942.1	XP_008770164.1	9 - 10	1302		69
GenBank mRNA	BC162012.1	-	9 - 10	1076	9091712	69
	FQ209715.1	-	9 - 10	1128		69

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800000034.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

transcription cofactor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

G1/S transition of mitotic cell cycle
negative regulation of transcription from RNA polymerase II promoter
double-strand break repair via homologous recombination
DNA catabolic process, endonucleolytic
blastocyst hatching
mitotic nuclear division
DNA double-strand break processing involved in repair via single-strand annealing
response to estradiol
cell division
meiotic cell cycle

Function(s)

single-stranded DNA endodeoxyribonuclease activity
RNA polymerase II repressing transcription factor binding
RNA polymerase II transcription corepressor activity
molecular_function
damaged DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1800000300.rn.1	TC1800000034.rn.1	RTA TC