Rn01761258_m1 Best Coverage

• Gene Symbol: Mgrn1
• Gene Name: mahogunin ring finger 1, E3 ubiquitin protein ligase
• Gene Aliases: RGD1311862
• Chromosome Location: Chr.10: 10832573 - 10881981 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Mgrn1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001013964.1	NP_001013986.1	8 - 9	863		62
	XM_006245792.2	XP_006245854.1	8 - 9	867		62
	XM_006245793.2	XP_006245855.1	8 - 9	864		62
	XM_006245794.2	XP_006245856.1	8 - 9	866		62
	XM_006245795.2	XP_006245857.1	8 - 9	863		62
	XM_006245796.2	XP_006245858.1	8 - 9	867		62
	XM_008767485.1	XP_008765707.1	8 - 9	863		62
	XM_008767486.1	XP_008765708.1	8 - 9	863		62
GenBank mRNA	BC083621.1	-	8 - 9	863	7134018	62
	HE574489.1	-	8 - 9	727		62
	HE574490.1	-	8 - 9	727		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000002295.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Apoptosis, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Mgrn1

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein polyubiquitination
protein monoubiquitination
biological_process
endosome to lysosome transport
negative regulation of cAMP-mediated signaling
negative regulation of G-protein coupled receptor protein signaling pathway

Function(s)

molecular_function
ubiquitin-protein transferase activity
protein binding
zinc ion binding
ligase activity
ubiquitin protein ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000020395.rn.1	TC1000002295.rn.1	RTA TC