Rn01764900_m1

• Gene Symbol: Vapa
• Gene Name: VAMP (vesicle-associated membrane protein)-associated protein A
• Gene Aliases: -
• Chromosome Location: Chr.9: 113300831 - 113331872 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vapa
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031631.2	NP_113819.3	3 - 4	563		128
	XM_008767384.1	XP_008765606.1	3 - 4	1116		128
GenBank mRNA	AF086630.1	-	3 - 4	311		128
	BC061875.1	-	3 - 4	563	5598274	128
	FQ228815.1	-	3 - 4	420		128
	FQ234023.1	-	3 - 4	320		128

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900002589.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vapa

Panther Classification:

Molecular Function -

membrane traffic protein, membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

ER to Golgi vesicle-mediated transport
endoplasmic reticulum organization
signal transduction
cell death
neuron projection development
protein folding in endoplasmic reticulum
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation by host of viral release from host cell
negative regulation by host of viral genome replication
positive regulation by host of viral genome replication
protein localization to endoplasmic reticulum
COPII-coated vesicle budding

Function(s)

signal transducer activity
microtubule binding
protein domain specific binding
FFAT motif binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0900021175.rn.1	TC0900002589.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900021173.rn.1	TC0900002589.rn.1	RTA TC