Rn01772818_m1 Best Coverage

• Gene Symbol: Skint1
• Gene Name: selection and upkeep of intraepithelial T cells 1
• Gene Aliases: -
• Chromosome Location: Chr.5: 131915491 - 131943133 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Skint1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001135916.1	NP_001129388.1	3 - 4	487		95
GenBank mRNA	EU650232.1	-	3 - 4	487		95

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001212.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

immunoglobulin receptor superfamily

Gene Ontology Categories:

Process(es)

positive regulation of T cell differentiation in thymus
positive thymic T cell selection

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P097587	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	869618	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	840043	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	487146	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	287628	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	24122	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	870593	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	711712	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	389438	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	613410	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	488566	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	559234	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	783980	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	568713	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	760041	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	629512	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	105181	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	139044	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	4745	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	84877	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P097587	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P097587	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P097587	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10871032	-	-
Affymetrix Rat Gene 1.0 ST Array	10871031	-	-
Affymetrix Rat Gene 1.1 ST Array	10871030	-	-
Affymetrix Rat Clariom S Assay	PSR0500008271.rn.1	TC0500001212.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500008276.rn.1	TC0500001212.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500008273.rn.1	TC0500001212.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500008274.rn.1	TC0500001212.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500008278.rn.1	TC0500001212.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500008277.rn.1	TC0500001212.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500008272.rn.1	TC0500001212.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500008275.rn.1	TC0500001212.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10871030	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21493689	-	-