Rn01772897_m1

Gene Symbol:

LOC103693257 Ercc4 Ercc4l1

Gene Name:

DNA repair endonuclease XPF-like

excision repair cross-complementation group 4

excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1

Gene Aliases:

-

RGD1560340

Ercc4

Chromosome Location:

Chr.10: 975664 - 1010029 on Build Rnor_6.0

Chromosome Location:

Chr.10: 2010140 - 2037937 on Build Rnor_6.0

Chromosome Location:

Chr.10: 96395 - 117648 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

-

Assay Details

Gene Symbol: LOC103693257
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008767457.1	XP_008765679.1	7 - 8	1127		93

Gene Symbol: Ercc4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008767478.1	XP_008765700.1	7 - 8	1146		93

Gene Symbol: Ercc4l1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008767455.1	XP_008765677.1	7 - 8	1127		93

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect transcript(s) from off target gene(s). Please contact Tech Support if you need more information.

• Set Membership: Amplicon length between 86 and 100, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

DNA metabolism protein, endodeoxyribonuclease, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

resolution of meiotic recombination intermediates
telomere maintenance
double-strand break repair via homologous recombination
DNA catabolic process, endonucleolytic
DNA repair
nucleotide-excision repair
nucleotide-excision repair, DNA incision, 3'-to lesion
nucleotide-excision repair, DNA incision, 5'-to lesion
response to UV
UV protection
obsolete telomere maintenance via telomere shortening
negative regulation of telomere maintenance
nucleotide-excision repair, DNA incision
nucleotide-excision repair involved in interstrand cross-link repair
biological_process

Function(s)

single-stranded DNA endodeoxyribonuclease activity
TFIID-class transcription factor binding
damaged DNA binding
single-stranded DNA binding
endodeoxyribonuclease activity
protein C-terminus binding
structure-specific DNA binding
protein N-terminus binding
molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P098725	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P053338	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P053338	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P053338	-	-

Array Name	Probe IDs	Targets	Target Type
Rat Genome 230 2.0 Array	1397039_at	-	-
Rat Genome 230 2.0 Array	1397039_PM_at	-	-
Rat Expression Set 230	1397039_PM_at	-	-
Rat Expression Set 230	1397039_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21575598	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1368711	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357043	-	-