Rn01775090_mH Best Coverage

• Gene Symbol: Cyp2d1
• Gene Name: cytochrome P450, family 2, subfamily d, polypeptide 1
• Gene Aliases: Cyp2d9
• Chromosome Location: Chr.7: 123625641 - 123630045 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cyp2d1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_153313.1	NP_695225.1	4 - 5	724		174
GenBank mRNA	AB008422.1	-	4 - 5	724		174
	BC078696.1	-	4 - 5	731	7126263	174
	FQ219613.1	-	4 - 5	774		174
	J02867.1	-	4 - 5	724		174
	M16654.1	-	4 - 5	724		174
	M22328.1	-	4 - 5	740		174

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700003577.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cyp2d1

Panther Classification:

Molecular Function -

oxidoreductase, oxygenase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

xenobiotic metabolic process
response to organic substance
response to organic cyclic compound
arachidonic acid metabolic process
response to drug
exogenous drug catabolic process
oxidation-reduction process

Function(s)

monooxygenase activity
iron ion binding
arachidonic acid epoxygenase activity
steroid hydroxylase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
oxygen binding
heme binding
aromatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Rat CGH Microarray 1x1M	752221	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	530066	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P019790	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P019790	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P019790	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10905740	-	-
Affymetrix Rat Gene 1.0 ST Array	10905742	-	-
Affymetrix Rat Gene 1.0 ST Array	10905739	-	-
Affymetrix Rat Gene 1.0 ST Array	10905741	-	-
Affymetrix Rat Gene 1.1 ST Array	10905738	-	-
Rat Genome 230 2.0 Array	1370377_at	-	-
Rat Genome 230 2.0 Array	1370377_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700028243.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028246.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028242.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028247.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028240.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028245.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028238.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028244.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028237.rn.1	TC0700003577.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700028241.rn.1	TC0700003577.rn.1	RTA TC
Rat Expression Set 230	1370377_PM_at	-	-
Rat Expression Set 230	1370377_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10905738	-	-
Rat Genome U34 Set	J02869mRNA_s_at	-	-
Rat Genome U34 Set	J02869mRNA_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21302887	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1363258	-	-
RatRef-12 Expression BeadChip	ILMN_59508	-	-