Rn04244112_s1

Gene Symbol:

Mir423 Nsrp1

Gene Name:

microRNA mir-423

nuclear speckle splicing regulatory protein 1

Gene Aliases:

rno-mir-423

Ccdc55, NSrp70, RGD1309863

Chromosome Location:

Chr.10: 63098366 - 63098444 on Build Rnor_6.0

Chromosome Location:

Chr.10: 63098115 - 63133188 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Mir423
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_032276.1		1	43		65

Gene Symbol: Nsrp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008768018.1	XP_008766240.1	1	260		65

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	EF-hand calcium binding domain 5	Efcab5	RGD1309650	-12.5kb	Sense	Chr. 10 - 62970665 - 63085849 on NCBI Build Rnor_6.0
Downstream	solute carrier family 6 (neurotransmitter transporter), member 4	Slc6a4		55.2kb	Anti-sense	Chr. 10 - 63153656 - 63186439 on NCBI Build Rnor_6.0

More Information

Additional Information:

This assay is in the 5'UTR region of the XM_008768018.1 transcripts.

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Rattus norvegicus, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

regulation of alternative mRNA splicing, via spliceosome
mRNA processing
nucleocytoplasmic transport
RNA splicing
developmental process

Function(s)

mRNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000009874.rn.1	TC1000001091.rn.1	RTA TC