Rn04339043_m1 Best Coverage

• Gene Symbol: Nr1i3
• Gene Name: nuclear receptor subfamily 1, group I, member 3
• Gene Aliases: CAR
• Chromosome Location: Chr.13: 89586224 - 89591278 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nr1i3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001270838.1	NP_001257767.1	3 - 4	423		83
	NM_001270839.1	NP_001257768.1	3 - 4	423		83
	NM_001270840.1	NP_001257769.1	3 - 4	423		83
	NM_022941.4	NP_075230.1	3 - 4	423		83
	XM_006250261.2	XP_006250323.1	3 - 4	532		83
	XM_008769758.1	XP_008767980.1	3 - 4	535		83
	XM_008769759.1	XP_008767981.1	3 - 4	535		83
GenBank mRNA	AB104736.1	-	3 - 4	476		83
	AB105072.1	-	3 - 4	476		83
	AB204897.1	-	2 - 3	274		83
	AB204898.1	-	2 - 3	274		83
	AB204899.1	-	2 - 3	274		83
	AB204900.1	-	2 - 3	274		83
	AF133094.1	-	2 - 3	274		83
	AF133095.1	-	2 - 3	274		83
	BC089763.1	-	3 - 4	423	7324318	83

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300000752.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nr1i3

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
intracellular receptor signaling pathway
steroid hormone mediated signaling pathway
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
steroid hormone receptor activity
thyroid hormone receptor activity
zinc ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1300005193.rn.1	TC1300000752.rn.1	RTA TC