mmu481430_mir

Specificity testing was performed using mouse anti-targets.

Assay Name:	mmu-miR-9-3p
Stem-loop Accession Number:	MI0000466
miRBase Version:	v22.1
Chromosome Location:	Chr.1: 156420341 - 156420429 [-] on Build GRCh38
Mature miRNA Sequence:	AUAAAGCUAGAUAACCGAAAGU
Species:	Human, Mouse, Rat, Monodelphis domestica, Pteropus alecto, Rhesus monkey, Salmo salar, Taeniopygia guttata
Product Type:	TaqMan^™ Advanced miRNA Assay

Assay Details

• Gene Family ID: MIPF0000014, mir-9

• Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU

miRBase Details:

Species	miRBase ID	miRBase Accession Number
Human	hsa-miR-9-3p	MIMAT0000442
Mouse	mmu-miR-9-3p	MIMAT0000143
Rat	rno-miR-9a-3p	MIMAT0004708
Monodelphis domestica	mdo-miR-9a-3p	MIMAT0004088
Pteropus alecto	pal-miR-9-3p	MIMAT0039885
Rhesus monkey	mml-miR-9-3-3p	MIMAT0031078
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Salmo salar	ssa-miR-9a-4-3p	MIMAT0032725
Salmo salar	ssa-miR-9a-5-3p	MIMAT0032726
Taeniopygia guttata	tgu-miR-9-3p	MIMAT0014627

Stem-loop Details

Human

Stem-loop ID	hsa-mir-9-1
Stem-loop Accession #	MI0000466
Stem-loop Sequence	CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA
Chromosome Location	Chr. 1 - 156420341 - 156420429 [-] on Build GRCh38
Mature MicroRNA	miRBase Accession #: MIMAT0000442 miRBase ID: hsa-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 1 - 156420341 - 156420429 [-] on Build GRCh38

Stem-loop ID	hsa-mir-9-2
Stem-loop Accession #	MI0000467
Stem-loop Sequence	GGAAGCGAGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGUAUUGGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAACUCCUUCA
Chromosome Location	Chr. 5 - 88666853 - 88666939 [-] on Build GRCh38
Mature MicroRNA	miRBase Accession #: MIMAT0000442 miRBase ID: hsa-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 1 - 156420341 - 156420429 [-] on Build GRCh38

Stem-loop ID	hsa-mir-9-3
Stem-loop Accession #	MI0000468
Stem-loop Sequence	GGAGGCCCGUUUCUCUCUUUGGUUAUCUAGCUGUAUGAGUGCCACAGAGCCGUCAUAAAGCUAGAUAACCGAAAGUAGAAAUGAUUCUCA
Chromosome Location	Chr. 15 - 89368017 - 89368106 [+] on Build GRCh38
Mature MicroRNA	miRBase Accession #: MIMAT0000442 miRBase ID: hsa-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 1 - 156420341 - 156420429 [-] on Build GRCh38

Mouse

Stem-loop ID	mmu-mir-9-1
Stem-loop Accession #	MI0000720
Stem-loop Sequence	CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA
Chromosome Location	Chr. 3 - 88215598 - 88215686 [+] on Build GRCm38
Mature MicroRNA	miRBase Accession #: MIMAT0000143 miRBase ID: mmu-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 13 - 83738814 - 83738885 [+] on Build GRCm38

Stem-loop ID	mmu-mir-9-2
Stem-loop Accession #	MI0000157
Stem-loop Sequence	GUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGUAUUGGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAC
Chromosome Location	Chr. 13 - 83738814 - 83738885 [+] on Build GRCm38
Mature MicroRNA	miRBase Accession #: MIMAT0000143 miRBase ID: mmu-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 13 - 83738814 - 83738885 [+] on Build GRCm38

Stem-loop ID	mmu-mir-9-3
Stem-loop Accession #	MI0000721
Stem-loop Sequence	GGAGGCCCGUUUCUCUCUUUGGUUAUCUAGCUGUAUGAGUGCCACAGAGCCGUCAUAAAGCUAGAUAACCGAAAGUAGAAAUGACUCUCA
Chromosome Location	Chr. 7 - 79505264 - 79505353 [+] on Build GRCm38
Mature MicroRNA	miRBase Accession #: MIMAT0000143 miRBase ID: mmu-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 13 - 83738814 - 83738885 [+] on Build GRCm38

Rat

Stem-loop ID	rno-mir-9a-1
Stem-loop Accession #	MI0000838
Stem-loop Sequence	CGGGGUUGGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGGUGUGGAGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAAUAACCCCA
Chromosome Location	Chr. 2 - 187582799 - 187582887 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0004708 miRBase ID: rno-miR-9a-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 2 - 187582799 - 187582887 [+] on Build Rnor_6.0

Stem-loop ID	rno-mir-9a-2
Stem-loop Accession #	MI0000840
Stem-loop Sequence	GGAAGCGAGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGUAUUGGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAACUCCUUCA
Chromosome Location	Chr. 2 - 11884671 - 11884757 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0004708 miRBase ID: rno-miR-9a-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 2 - 187582799 - 187582887 [+] on Build Rnor_6.0

Stem-loop ID	rno-mir-9a-3
Stem-loop Accession #	MI0000839
Stem-loop Sequence	GGAGGCCCGUUUCUCUCUUUGGUUAUCUAGCUGUAUGAGUGCCACAGAGCCGUCAUAAAGCUAGAUAACCGAAAGUAGAAAUGACUCUAA
Chromosome Location	Chr. 1 - 141229353 - 141229442 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0004708 miRBase ID: rno-miR-9a-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: Chr. 2 - 187582799 - 187582887 [+] on Build Rnor_6.0

Monodelphis domestica

Stem-loop ID	mdo-mir-9a-1
Stem-loop Accession #	MI0005272
Stem-loop Sequence	CGAGGCCCGUUUCUCUCUUUGGUUAUCUAGCUGUAUGAGUGUUAUUGAGCUAUCAUAAAGCUAGAUAACCGAAAGUAGAAAUGACUUUCA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0004088 miRBase ID: mdo-miR-9a-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Stem-loop ID	mdo-mir-9a-2
Stem-loop Accession #	MI0005271
Stem-loop Sequence	GGAAGUGAGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGUAUUGGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAAACUCCUUCA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0004088 miRBase ID: mdo-miR-9a-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Stem-loop ID	mdo-mir-9a-3
Stem-loop Accession #	MI0023762
Stem-loop Sequence	UCUUUGGUUAUCUAGCUGUAUGAGUGGUGUCGAGUCUUCAUAAAGCUAGAUAACCGAAAGUA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0004088 miRBase ID: mdo-miR-9a-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Pteropus alecto

Stem-loop ID	pal-mir-9-1
Stem-loop Accession #	MI0032381
Stem-loop Sequence	UCUUUGGUUAUCUAGCUGUAUGAGUGUAUUGGUCUUCAUAAAGCUAGAUAACCGAAAGU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0039885 miRBase ID: pal-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Stem-loop ID	pal-mir-9-2
Stem-loop Accession #	MI0032383
Stem-loop Sequence	UCUUUGGUUAUCUAGCUGUAUGAGUGCCACAGAGCCGUCAUAAAGCUAGAUAACCGAAAGU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0039885 miRBase ID: pal-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Rhesus monkey

Stem-loop ID	mml-mir-9-3
Stem-loop Accession #	MI0007586
Stem-loop Sequence	GGAGGCCCGUUUCUCUCUUUGGUUAUCUAGCUGUAUGAGUGCCACAGAGCCGUCAUAAAGCUAGAUAACCGAAAGUAGAAAUGACUCUCA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0031078 miRBase ID: mml-miR-9-3-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Salmo salar

Stem-loop ID	ssa-mir-9a-4
Stem-loop Accession #	MI0026772
Stem-loop Sequence	UCUUUGGUUAUCUAGCUGUAUGAGUGAUGUACAUUCUUCAUAAAGCUAGAUAACCGAAAGU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0032725 miRBase ID: ssa-miR-9a-4-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Stem-loop ID	ssa-mir-9a-5
Stem-loop Accession #	MI0026773
Stem-loop Sequence	UCUUUGGUUAUCUAGCUGUAUGAGUGUUAAAUACCUGUCAUAAAGCUAGAUAACCGAAAGU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0032726 miRBase ID: ssa-miR-9a-5-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Taeniopygia guttata

Stem-loop ID	tgu-mir-9-1
Stem-loop Accession #	MI0013692
Stem-loop Sequence	GAUGUUUCUGUCUUUGGUUAUCUAGCUGUAUGAGUGUUGUGGAGCCAUCAUAAAGCUAGAUAACCGAAAGUAG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0014627 miRBase ID: tgu-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

Stem-loop ID	tgu-mir-9-2
Stem-loop Accession #	MI0013691
Stem-loop Sequence	CGAGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGUUUUGGUCUUCAUAAAGCUAGAUAACCGAAAGUAAAA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0014627 miRBase ID: tgu-miR-9-3p Mature miRNA Sequence: AUAAAGCUAGAUAACCGAAAGU Chromosome Location: NA

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