60833

• Gene Symbol: Ctcf
• Gene Name: CCCTC-binding factor
• Gene Aliases: AW108038
• Chromosome Location: Chr.8: 105636538 - 105682922 on Build GRCm38
• UniGene ID: Mm.269474
• Species: Mouse
• Species Specific ID (Flybase ID): -

siRNA Details

Gene Symbol: Ctcf
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_181322.3	NP_851839.1	3, 4	1098
GenBank mRNA	AB221631.1	-	1, 2	789
	AK132514.1	-	1, 2	379
	AK134247.1	-	1, 2	379
	AK140164.1	-	3, 4	1086
	BC046398.1	-	2, 3	822	3982679
	BC049131.1	-	3, 4	1057	6825952
	BC058240.1	-	2, 3	851	6307925
	U51037.1	-	3, 4	1095

More Information

Other Species Targeted

This siRNA also targets the following transcripts in Rat: NM_031824, XM_008772537, XM_006255536, XM_008772539, XM_008772536, and others.

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA methylation
regulation of gene expression by genetic imprinting
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
chromosome segregation
dosage compensation by inactivation of X chromosome
maintenance of DNA methylation
positive regulation of gene expression
negative regulation of gene expression
chromatin modification
nucleosome positioning
regulation of histone methylation
regulation of histone acetylation
regulation of gene expression, epigenetic
regulation of molecular function, epigenetic
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
nucleic acid binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
protein binding
chromatin insulator sequence binding
sequence-specific DNA binding
transcription regulatory region DNA binding
metal ion binding