HSS146678

Gene Symbol:

LRCH3 ANAPC16 ANKRD40 CHORDC1 CPT2 DKFZP434L187 DNAPTP3 FARP1 FKBP14 GLUL IKZF3 LINC00094 LOC105371451 MIPOL1 PKD1L2 PLEKHA5 POLR2F SLC8B1 SNHG20 SPDYE1 SPDYE2 SPDYE2B SRSF11P1 STT3B TCOF1 TIE1 VAPA ZKSCAN1 ZNF346-IT1 ZNF426 ZNF687 ZNHIT3

Gene Name:

leucine rich repeats and calponin homology domain containing 3

anaphase promoting complex subunit 16

ankyrin repeat domain 40

cysteine and histidine rich domain containing 1

carnitine palmitoyltransferase 2

uncharacterized LOC26082

histone demethylase UTY-like

FERM, ARH/RhoGEF and pleckstrin domain protein 1

FK506 binding protein 14

glutamate-ammonia ligase

IKAROS family zinc finger 3

long intergenic non-protein coding RNA 94

uncharacterized LOC105371451

mirror-image polydactyly 1

polycystin 1 like 2 (gene/pseudogene)

pleckstrin homology domain containing A5

RNA polymerase II subunit F

solute carrier family 8 member B1

small nucleolar RNA host gene 20

speedy/RINGO cell cycle regulator family member E1

speedy/RINGO cell cycle regulator family member E2

speedy/RINGO cell cycle regulator family member E2B

serine and arginine rich splicing factor 11 pseudogene 1

STT3B, catalytic subunit of the oligosaccharyltransferase complex

treacle ribosome biogenesis factor 1

tyrosine kinase with immunoglobulin like and EGF like domains 1

VAMP associated protein A

zinc finger with KRAB and SCAN domains 1

ZNF346 intronic transcript 1

zinc finger protein 426

zinc finger protein 687

zinc finger HIT-type containing 3

Gene Aliases:

-

APC16, C10orf104, CENP-27, MSAG, bA570G20.3

-

CHP1

CPT1, CPTASE, IIAE4

-

-

CDEP, FARP1-IT1, PLEKHC2, PPP1R75

EDSKMH, FKBP22, IPBP12

GLNS, GS, PIG43, PIG59

AIO, AIOLOS, ZNFN1A3

LP2477, NCRNA00094, bA374P20.3

-

CCDC193

PC1L2

PEPP-2, PEPP2

HRBP14.4, POLRF, RPABC14.4, RPABC2, RPB14.4, RPB6, RPC15

NCKX6, NCLX, SLC24A6

C17orf86, LINC00338, NCRNA00338, SCARNA16HG

Ringo1, SPDYE, WBSCR19

SPDYB2-L1

SPDYE2L

-

CDG1X, SIMP, STT3-B

MFD1, TCS, TCS1, treacle

JTK14, TIE

VAP-33, VAP-A, VAP33, hVAP-33

9130423L19Rik, KOX18, PHZ-37, ZNF139, ZNF36, ZSCAN33

-

K-RBP

PDB6

TRIP3

Chromosome Location:

Chr.3: 197790855 - 197889346 on Build GRCh38

Chromosome Location:

Chr.10: 72216000 - 72235860 on Build GRCh38

Chromosome Location:

Chr.17: 50693190 - 50707909 on Build GRCh38

Chromosome Location:

Chr.11: 90200429 - 90223364 on Build GRCh38

Chromosome Location:

Chr.1: 53196429 - 53214197 on Build GRCh38

Chromosome Location:

Chr.15: 30196036 - 30214540 on Build GRCh38

Chromosome Location:

-

Chromosome Location:

Chr.13: 98142562 - 98449773 on Build GRCh38

Chromosome Location:

Chr.7: 30010583 - 30026801 on Build GRCh38

Chromosome Location:

Chr.1: 182378093 - 182392206 on Build GRCh38

Chromosome Location:

Chr.17: 39757715 - 39864188 on Build GRCh38

Chromosome Location:

Chr.9: 134025439 - 134031597 on Build GRCh38

Chromosome Location:

Chr.1: 155313708 - 155317353 on Build GRCh38

Chromosome Location:

Chr.14: 37197888 - 37579207 on Build GRCh38

Chromosome Location:

Chr.16: 81100879 - 81220370 on Build GRCh38

Chromosome Location:

Chr.12: 19129680 - 19376400 on Build GRCh38

Chromosome Location:

Chr.22: 37953663 - 38041915 on Build GRCh38

Chromosome Location:

Chr.12: 113298766 - 113335142 on Build GRCh38

Chromosome Location:

Chr.17: 77088643 - 77094986 on Build GRCh38

Chromosome Location:

Chr.7: 43997855 - 44011040 on Build GRCh38

Chromosome Location:

Chr.7: 102551232 - 102565227 on Build GRCh38

Chromosome Location:

Chr.7: 102650325 - 102663525 on Build GRCh38

Chromosome Location:

Chr.12: 19306671 - 19308236 on Build GRCh38

Chromosome Location:

Chr.3: 31532501 - 31637622 on Build GRCh38

Chromosome Location:

Chr.5: 150357639 - 150400308 on Build GRCh38

Chromosome Location:

Chr.1: 43300895 - 43323110 on Build GRCh38

Chromosome Location:

Chr.18: 9913958 - 9960021 on Build GRCh38

Chromosome Location:

Chr.7: 100015572 - 100045523 on Build GRCh38

Chromosome Location:

-

Chromosome Location:

Chr.19: 9523224 - 9538673 on Build GRCh38

Chromosome Location:

Chr.1: 151281555 - 151291905 on Build GRCh38

Chromosome Location:

Chr.17: 36486627 - 36499310 on Build GRCh38

UniGene ID:

Hs.518414

Hs.426296

Hs.463426

Hs.112482

Hs.713535

Hs.652128

Hs.203717

Hs.403917

Hs.390838

Hs.132016

Hs.371680

Hs.654869

-

Hs.660396

Hs.413525

Hs.188614

Hs.436578

Hs.286194

Hs.720923

Hs.645483

Hs.656428

Hs.433879

Hs.655546

Hs.475812

Hs.519672

Hs.78824

Hs.165195

Hs.615360

-

Hs.386476

Hs.186756

Hs.2210

Species:

Human

Species Specific ID (Flybase ID):

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siRNA Details

Gene Symbol: LRCH3
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_005269365.2	XP_005269422.1	20	8639
	XM_005269367.2	XP_005269424.1	19	8567
	XM_006713791.3	XP_006713854.1	21	5718
	XM_006713792.3	XP_006713855.1	20	5646
	XM_006713793.2	XP_006713856.1	20	5610
	XM_017007352.1	XP_016862841.1	18	8513
GenBank mRNA	AK125235.1	-	1	170

Gene Symbol: ANAPC16
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001242546.1	NP_001229475.1	5	2979
	NM_001242547.1	NP_001229476.1	4	2587
	NM_001242548.1	NP_001229477.1	3	2512
	NM_173473.3	NP_775744.1	4	2653
	NR_038391.1		3	2418
	NR_038392.1		3	2484
GenBank mRNA	AK023981.1	-	1	1539

Gene Symbol: ANKRD40
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_052855.3	NP_443087.1	5	3403
	XM_017025296.1	XP_016880785.1	5	3150
GenBank mRNA	AK054795.1	-	1	924
	CR627413.1	-	5	3186

Gene Symbol: CHORDC1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK094608.1	-	1	640

Gene Symbol: CPT2
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_000098.2	NP_000089.1	5	2647
	XM_005270484.1	XP_005270541.1	5	2246
GenBank mRNA	AK223052.1	-	3	1890
	BC002445.2	-	5	2256	3346025
	BC005172.2	-	5	2256	3605012
	BU629852.1	-	1	460
	M58581.1	-	5	2232
	U09648.1	-	5	2648

Gene Symbol: DKFZP434L187
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NR_026771.1		3	1253
GenBank mRNA	AL117445.1	-	2	1143
	BC130408.1	-	3	1253
	BC130410.1	-	3	1253

Gene Symbol: DNAPTP3
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AY450391.1	-	1	222

Gene Symbol: FARP1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK123565.1	-	1	3690

Gene Symbol: FKBP14
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_017946.3	NP_060416.1	4	2218
	NR_046478.1		5	2310
	NR_046479.1		3	2066
GenBank mRNA	AK000738.1	-	4	2070
	AY358643.1	-	4	2094

Gene Symbol: GLUL
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001033044.3	NP_001028216.1	7	6649
	NM_001033056.3	NP_001028228.1	7	6351
	NM_002065.6	NP_002056.2	8	7005
GenBank mRNA	AW954632.1	-	1	595

Gene Symbol: IKZF3
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001257408.1	NP_001244337.1	7	4568
	NM_001257409.1	NP_001244338.1	6	4451
	NM_001257410.1	NP_001244339.1	7	4409
	NM_001257411.1	NP_001244340.1	6	4241
	NM_001257412.1	NP_001244341.1	5	4124
	NM_001257413.1	NP_001244342.1	4	4007
	NM_001257414.1	NP_001244343.1	5	4268
	NM_001284514.1	NP_001271443.1	9	4796
	NM_001284515.1	NP_001271444.1	8	4628
	NM_001284516.1	NP_001271445.1	3	4240
	NM_012481.4	NP_036613.2	8	4670
	NM_183228.2	NP_899051.1	7	4502
	NM_183229.2	NP_899052.1	7	4553
	NM_183230.2	NP_899053.1	7	4553
	NM_183231.2	NP_899054.1	6	4385
	NM_183232.2	NP_899055.1	6	4436

Gene Symbol: LINC00094
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NR_015427.2		3	2718

Gene Symbol: LOC105371451
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK125505.1	-	1	764

Gene Symbol: MIPOL1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_017020991.1	XP_016876480.1	17	2323
	XM_017020992.1	XP_016876481.1	16	2186
	XM_017020993.1	XP_016876482.1	16	2196
	XM_017020994.1	XP_016876483.1	13	1841
	XM_017020995.1	XP_016876484.1	15	2057
	XM_017020996.1	XP_016876485.1	15	2073
	XM_017020997.1	XP_016876486.1	14	1946

Gene Symbol: PKD1L2
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AL832135.1	-	1	2576

Gene Symbol: PLEKHA5
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	BC000969.2	-	8	2268

Gene Symbol: POLR2F
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK098727.1	-	1	1975
	AL832562.1	-	1	2210

Gene Symbol: SLC8B1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK095092.1	-	1	671

Gene Symbol: SNHG20
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK098448.1	-	1	140

Gene Symbol: SPDYE1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_005249719.3	XP_005249776.1	9	3677
	XM_017012015.1	XP_016867504.1	9	3615
	XM_017012016.1	XP_016867505.1	8	3027

Gene Symbol: SPDYE2
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_017012223.1	XP_016867712.1	9	3714

Gene Symbol: SPDYE2B
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_005250093.3	XP_005250150.1	8	4280
	XM_011515702.2	XP_011514004.1	6	5237

Gene Symbol: SRSF11P1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK021937.1	-	1	517

Gene Symbol: STT3B
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_011533465.1	XP_011531767.1	10	1820
GenBank mRNA	AK074587.1	-	10	1486
	AK311488.1	-	10	1710

Gene Symbol: TCOF1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AB209317.1	-	13	5017

Gene Symbol: TIE1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_017002207.1	XP_016857696.1	15	2796

Gene Symbol: VAPA
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_003574.5	NP_003565.4	7	4197
	NM_194434.2	NP_919415.2	6	4062
GenBank mRNA	AK024299.1	-	1	2419

Gene Symbol: ZKSCAN1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001287054.1	NP_001273983.1	8	5604
	NM_001287055.1	NP_001273984.1	4	4907
	NM_003439.2	NP_003430.1	6	5575
GenBank mRNA	AK090495.1	-	1	866
	AY260738.1	-	3	1210

Gene Symbol: ZNF346-IT1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	CV815148.1	-	1	19

Gene Symbol: ZNF426
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001300883.2	NP_001287812.1	6	2280
	NM_001318055.1	NP_001304984.1	7	2016
	NM_001318056.1	NP_001304985.1	7	2060
	NM_024106.2	NP_077011.1	8	2143
	XM_017027293.1	XP_016882782.1	7	2079
	XM_017027294.1	XP_016882783.1	5	2185
GenBank mRNA	AB209837.1	-	6	2225
	AK095759.1	-	6	2198
	BC001791.1	-	8	2125	3543910

Gene Symbol: ZNF687
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001304763.1	NP_001291692.1	2	782
GenBank mRNA	AB037862.1	-	2	782

Gene Symbol: ZNHIT3
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AB209193.1	-	1	655

More Information

Panther Classification:

Molecular Function -

acyltransferase, chaperone, ligase, C2H2 zinc finger transcription factor, glycosyltransferase, transferase, metabolite interconversion enzyme, RNA metabolism protein, transmembrane signal receptor, membrane traffic protein, membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

mitotic nuclear division
protein ubiquitination
anaphase-promoting complex-dependent catabolic process
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
cell division
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
biological_process
fatty acid beta-oxidation
carnitine shuttle
protein peptidyl-prolyl isomerization
IRE1-mediated unfolded protein response
chaperone-mediated protein folding
neurotransmitter uptake
glutamate catabolic process
glutamine biosynthetic process
cell proliferation
cellular amino acid biosynthetic process
cellular response to starvation
response to glucose
ammonia assimilation cycle
positive regulation of insulin secretion
positive regulation of epithelial cell proliferation
protein homooligomerization
positive regulation of synaptic transmission, glutamatergic
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
mesoderm development
regulation of B cell proliferation
B cell activation
regulation of apoptotic process
regulation of B cell differentiation
regulation of lymphocyte differentiation
positive regulation of transcription from RNA polymerase II promoter
regulation of protein kinase activity
glycoprotein catabolic process
response to unfolded protein
protein N-linked glycosylation via asparagine
ER-associated ubiquitin-dependent protein catabolic process
co-translational protein modification
post-translational protein modification
angiogenesis
vasculogenesis
in utero embryonic development
signal transduction
negative regulation of angiogenesis
peptidyl-tyrosine phosphorylation
negative regulation of cell migration
response to retinoic acid
plasma membrane fusion
ER to Golgi vesicle-mediated transport
endoplasmic reticulum organization
cell death
sphingolipid biosynthetic process
neuron projection development
protein folding in endoplasmic reticulum
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation by host of viral release from host cell
negative regulation by host of viral genome replication
positive regulation by host of viral genome replication
membrane fusion
protein localization to endoplasmic reticulum
COPII-coated vesicle budding
cell-cell adhesion
transcription, DNA-templated
regulation of transcription, DNA-templated

Function(s)

protein binding
molecular_function
carnitine O-palmitoyltransferase activity
peptidyl-prolyl cis-trans isomerase activity
calcium ion binding
FK506 binding
magnesium ion binding
glutamate decarboxylase activity
glutamate-ammonia ligase activity
ATP binding
glutamate binding
manganese ion binding
identical protein binding
dynein light chain binding
RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
transcription factor activity, sequence-specific DNA binding
protein homodimerization activity
sequence-specific DNA binding
transcription regulatory region DNA binding
metal ion binding
protein heterodimerization activity
protein kinase binding
dolichyl-diphosphooligosaccharide-protein glycotransferase activity
transmembrane receptor protein tyrosine kinase activity
signal transducer activity
microtubule binding
protein domain specific binding
FFAT motif binding
cadherin binding involved in cell-cell adhesion
DNA binding