s15473

Gene Symbol:

DDX39B ATP6V1G2-DDX39B

Gene Name:

DEAD-box helicase 39B

ATP6V1G2-DDX39B readthrough (NMD candidate)

Gene Aliases:

BAT1, D6S81E, UAP56

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Chromosome Location:

Chr.6: 31530219 - 31542475 on Build GRCh38

Chromosome Location:

Chr.6: 31530219 - 31546848 on Build GRCh38

UniGene ID:

Hs.254042

Hs.254042

Species:

Human

Species Specific ID (Flybase ID):

-

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siRNA Details

Gene Symbol: DDX39B
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_004640.6	NP_004631.1	7	1456
	NM_080598.5	NP_542165.1	7	1326
	NR_037852.1		5	1235
GenBank mRNA	AB209217.1	-		3623
	AK127767.1	-	5	4721
	AK222912.1	-	7	951
	AK298194.1	-	5	763
	BC000361.2	-	7	837	2964517
	BC013006.2	-	6	930	3010263
	BT009909.1	-	6	798
	Z37166.1	-	7	966

Gene Symbol: ATP6V1G2-DDX39B
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NR_037853.1		9	1601
GenBank mRNA	BC004350.1	-	9	1335

More Information

Other Species Targeted

This siRNA also targets the following transcripts in Mouse: NM_001252457, NM_019693, AY255786, AK051034, AY255787, and others.

Gene Ontology Categories:

Process(es)

spliceosomal complex assembly
mRNA splicing, via spliceosome
liver development
termination of RNA polymerase II transcription
RNA export from nucleus
mRNA export from nucleus
RNA splicing
RNA secondary structure unwinding
mRNA 3'-end processing
positive regulation of DNA-templated transcription, elongation
positive regulation of translation
viral mRNA export from host cell nucleus
positive regulation of cell growth involved in cardiac muscle cell development
positive regulation of vascular smooth muscle cell proliferation
negative regulation of DNA damage checkpoint
positive regulation of DNA biosynthetic process

Function(s)

ATP-dependent RNA helicase activity
protein binding
ATP binding
RNA-dependent ATPase activity
ATPase activity
U6 snRNA binding
U4 snRNA binding
protein complex binding
ATP-dependent protein binding
poly(A) RNA binding