Name: [Hs00859622_m1] [LOC340074]
Creator: Thermo Fisher Scientific
Keywords: [LOC340074] Assay, [uncharacterized LOC340074] Assay

Assay Details

Gene Symbol: LOC340074
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027127.1		1 - 2	100		72
GenBank mRNA	BC040891.1	-	1 - 2	100		72

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BM554287.1	-	1 - 2	99		Chr. 5 - 135649712 - 135653934 [-] on Build GRCh38	72

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	C-X-C motif chemokine ligand 14	CXCL14	BMAC, BRAK, KEC, KS1, MIP-2g, MIP2G, NJAC, SCYB14	-73.1kb	Sense	Chr. 5 - 135570679 - 135579279 on NCBI Build GRCh38
Downstream	microRNA 5692c-1	MIR5692C1		149.1kb	Sense	Chr. 5 - 135802985 - 135803075 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500012111.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001805.hg.1

Set Membership:

Amplicon length between 71 and 85

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05024573.hg.1	TC05001805.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05024573.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05024573.hg.1	NR_027127.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012111.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012111.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012111.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012111.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012111.hg.1	NR_027127.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012111.hg.1	NR_027127.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012111.hg.1	NR_027127.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05024572.hg.1	TC05001805.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05024572.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05024572.hg.1	NR_027127.1	Refseq
Affymetrix Human Clariom D Assay	TC0500012111.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012111.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012111.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012111.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012111.hg.1	NR_027127.1	Refseq
Affymetrix Human Clariom D Assay	TC0500012111.hg.1	NR_027127.1	Refseq
Affymetrix Human Clariom D Assay	TC0500012111.hg.1	NR_027127.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500183813.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183813.hg.1	NR_027127.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500183813.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183813.hg.1	NR_027127.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500183813.hg.1	TC0500012111.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500183814.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183814.hg.1	NR_027127.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500183814.hg.1	ENST00000508452.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183814.hg.1	NR_027127.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500183814.hg.1	TC0500012111.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map