Assay Details

Gene Symbol: LINC00852
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026829.1		1	555		100
GenBank mRNA	AF280797.2	-	1	555		100
	BC015602.2	-	1	507		100
	BC132802.1	-	1	184		100
	BC132804.1	-	1	184		100

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BG491277.1	-	1	508		Chr. 3 - 10284467 - 10285107 [+] on Build GRCh38	100

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ghrelin opposite strand/antisense RNA	GHRLOS	GHRL-AS1, GHRLAS, NCRNA00068		Sense	Chr. 3 - 10280952 - 10293449 on NCBI Build GRCh38
Downstream	ghrelin/obestatin prepropeptide	GHRL	MTLRP	643.0	Anti-sense	Chr. 3 - 10285750 - 10292947 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300006583.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000059.hg.1

Additional Information:

This assay is in the 5'UTR region of the AF280797.2 transcripts.

Set Membership:

Amplicon length between 86 and 100

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03001337.hg.1	TC03000059.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03001337.hg.1	ENST00000475197.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03001337.hg.1	ENST00000538717.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03001337.hg.1	NR_026829.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006583.hg.1	ENST00000475197.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006583.hg.1	ENST00000538717.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006583.hg.1	NR_026829.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300145732.hg.1	ENST00000475197.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300145732.hg.1	ENST00000538717.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300145732.hg.1	NR_026829.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300145732.hg.1	ENST00000475197.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300145732.hg.1	ENST00000538717.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300145732.hg.1	NR_026829.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300145732.hg.1	TC0300006583.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0300006583.hg.1	ENST00000475197.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006583.hg.1	ENST00000538717.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006583.hg.1	NR_026829.1	Refseq

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System Message

Genomic Map