Assay Details

Gene Symbol: MMP3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_002422.4	NP_002413.1	6 - 7	1079		126
GenBank mRNA	AK223283.1	-	6 - 7	997		126
	AK223291.1	-	6 - 7	998		126
	AK313310.1	-	6 - 7	995		126
	BC069676.1	-	6 - 7	999	7262578	126
	BC069716.1	-	6 - 7	999	7262590	126
	BC074815.2	-	6 - 7	981	30915319	126
	BC074869.2	-	6 - 7	981	30915468	126
	BC105954.1	-	6 - 7	992	40033171	126
	BC107490.1	-	6 - 7	992	40033168	126
	BC107491.1	-	6 - 7	992	40033170	126
	J03209.1	-	6 - 7	936		126
	X05232.1	-	6 - 7	979		126

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100012133.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11002235.hg.1

Set Membership:

Ambion siRNA available

Amplicon length greater than or equal to 101

Protease

Mammalian Gene Collection

Recommended Assay

Homo sapiens

Human Tumor Metastasis Panel

Human Extracellular Matrix and Adhesion Molecules

Inventoried

Human Tumor Metastasis

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene MMP3

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000434103.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000434103.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000434103.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11026713.hg.1	ENST00000299855.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11026713.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11026713.hg.1	TC11002235.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11026714.hg.1	ENST00000299855.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11026714.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11026714.hg.1	TC11002235.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11026711.hg.1	ENST00000299855.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11026711.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11026711.hg.1	TC11002235.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11026712.hg.1	ENST00000299855.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11026712.hg.1	NM_002422.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11026712.hg.1	TC11002235.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1100193277.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193277.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193277.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193277.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193277.hg.1	TC1100012133.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100193278.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193278.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193278.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193278.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193278.hg.1	TC1100012133.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100193279.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193279.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193279.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193279.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193279.hg.1	TC1100012133.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000434103.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000434103.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000434103.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	ENST00000524478.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012133.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193276.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193276.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193276.hg.1	ENST00000299855.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193276.hg.1	NM_002422.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193276.hg.1	TC1100012133.hg.1	Clariom D TC

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Genomic Map