Assay Details

Gene Symbol: SETX
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015046.5	NP_055861.3	20 - 21	6837		99
	XM_005272171.1	XP_005272228.1	20 - 21	6838		99
	XM_005272172.2	XP_005272229.1	21 - 22	6936		99
	XM_005272173.2	XP_005272230.1	20 - 21	6974		99
	XM_011518404.2	XP_011516706.1	21 - 22	6978		99
	XM_011518405.2	XP_011516707.1	20 - 21	6996		99
	XM_011518406.2	XP_011516708.1	20 - 21	6838		99
	XM_011518407.1	XP_011516709.1	20 - 21	6838		99
	XM_017014495.1	XP_016869984.1	20 - 21	6909		99
	XM_017014496.1	XP_016869985.1	11 - 12	1505		99
	XM_017014497.1	XP_016869986.1	11 - 12	1874		99
GenBank mRNA	AB014525.2	-	18 - 19	6614		99
	AK001456.1	-	10 - 11	1373		99
	AK025601.1	-	5 - 6	468		99
	AK226007.1	-	11 - 12	1423		99
	AY362728.1	-	18 - 19	6661		99
	BC032600.2	-	11 - 12	1414		99
	BC032622.1	-	11 - 12	1715		99
	BC078166.1	-	10 - 11	1374		99
	BC106017.1	-	9 - 10	1225		99
	BC137350.1	-	19 - 20	6771	9021348	99
	BX537849.1	-	20 - 21	6822		99
	BX538166.1	-	20 - 21	6840		99
	CR749249.1	-	11 - 12	5318		99
	KU178559.1	-	8 - 9	1107		99
	KU178560.1	-	8 - 9	1107		99

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011803.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001673.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SETX

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09021306.hg.1	TC09001673.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09021306.hg.1	ENST00000224140.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09021306.hg.1	ENST00000372169.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09021306.hg.1	ENST00000393220.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09021306.hg.1	NM_015046.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900180610.hg.1	ENST00000224140.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900180610.hg.1	ENST00000436441.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900180610.hg.1	NM_015046.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900180610.hg.1	ENST00000224140.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900180610.hg.1	ENST00000436441.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900180610.hg.1	NM_015046.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900180610.hg.1	TC0900011803.hg.1	Clariom D TC

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Catalog #	4351372
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System Message

Genomic Map