Assay Details

Gene Symbol: SETX
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015046.5	NP_055861.3	11 - 12	5552		80
	XM_005272171.1	XP_005272228.1	11 - 12	5553		80
	XM_005272172.2	XP_005272229.1	12 - 13	5651		80
	XM_005272173.2	XP_005272230.1	11 - 12	5689		80
	XM_011518404.2	XP_011516706.1	12 - 13	5693		80
	XM_011518405.2	XP_011516707.1	11 - 12	5711		80
	XM_011518406.2	XP_011516708.1	11 - 12	5553		80
	XM_011518407.1	XP_011516709.1	11 - 12	5553		80
	XM_011518408.2	XP_011516710.1	11 - 12	5553		80
	XM_017014495.1	XP_016869984.1	11 - 12	5624		80
	XM_017014496.1	XP_016869985.1	2 - 3	220		80
	XM_017014497.1	XP_016869986.1	2 - 3	589		80
GenBank mRNA	AB014525.2	-	9 - 10	5329		80
	AK001456.1	-	1 - 2	88		80
	AK226007.1	-	2 - 3	138		80
	AY362728.1	-	9 - 10	5376		80
	BC032600.2	-	2 - 3	129		80
	BC032622.1	-	2 - 3	430		80
	BC078166.1	-	1 - 2	89		80
	BC137350.1	-	10 - 11	5486	9021348	80
	BX537849.1	-	11 - 12	5537		80
	BX538166.1	-	11 - 12	5555		80

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011803.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001673.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK001456.1,XM_017014496.1,XM_017014497.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SETX

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09021317.hg.1	TC09001673.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09021317.hg.1	ENST00000224140.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09021317.hg.1	ENST00000372169.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09021317.hg.1	ENST00000393220.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09021317.hg.1	NM_015046.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900180626.hg.1	ENST00000224140.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900180626.hg.1	ENST00000436441.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900180626.hg.1	NM_015046.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900180626.hg.1	ENST00000224140.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900180626.hg.1	ENST00000436441.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900180626.hg.1	NM_015046.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900180626.hg.1	TC0900011803.hg.1	Clariom D TC

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Catalog #	4351372
Price	4,430.00
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System Message

Genomic Map