Assay Details

Gene Symbol: TRIM9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015163.5	NP_055978.4	9 - 10	2837		81
	XM_005267301.3	XP_005267358.1	13 - 14	3643		81
	XM_005267302.3	XP_005267359.1	12 - 13	3454		81
	XM_006720018.3	XP_006720081.1	13 - 14	3697		81
	XM_017020943.1	XP_016876432.1	13 - 14	3685		81
	XM_017020944.1	XP_016876433.1	12 - 13	3508		81
	XM_017020945.1	XP_016876434.1	10 - 11	3442		81
	XM_017020946.1	XP_016876435.1	10 - 11	3430		81
	XM_017020947.1	XP_016876436.1	10 - 11	3388		81
	XM_017020948.1	XP_016876437.1	10 - 11	3376		81
	XM_017020949.1	XP_016876438.1	8 - 9	3145		81
	XM_017020950.1	XP_016876439.1	8 - 9	3091		81
GenBank mRNA	BC063872.1	-	9 - 10	3194	6471552	81
	D87458.2	-	9 - 10	2214		81
	DA173440.1	-	2 - 3	281		81

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1400009151.hg.1
This assay targets the same location as HTA transcript cluster(s) TC14001127.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

3' Most

Mammalian Gene Collection

Homo sapiens

1700

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRIM9

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR14012822.hg.1	ENST00000298355.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14012822.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14012822.hg.1	TC14001127.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000555170.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000555170.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000555170.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000555933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000555933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000555933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000555933.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000338969.9	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000360392.4	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000555170.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000555170.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000555170.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000555933.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000555933.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000555933.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000555933.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	ENST00000557456.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	TC1400009151.hg.1	NM_052978.4	Refseq
Affymetrix Human Clariom D Assay	PSR1400167592.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1400167592.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	PSR1400167592.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1400167592.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	PSR1400167592.hg.1	TC1400009151.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1400167591.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1400167591.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	PSR1400167591.hg.1	ENST00000298355.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1400167591.hg.1	NM_015163.5	Refseq
Affymetrix Human Clariom D Assay	PSR1400167591.hg.1	TC1400009151.hg.1	Clariom D TC

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Catalog #	4351372
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Genomic Map