Name: [Hs01021937_g1] [LINC01547]
Creator: Thermo Fisher Scientific
Keywords: [LINC01547] Assay, [long intergenic non-protein coding RNA 1547] Assay

Assay Details

Gene Symbol: LINC01547
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027128.1		3 - 4	748		99

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	FY210788.1	-	3 - 4	531	Chr. 21 - 44934315 - 44939873 [-] on Build GRCh38	99
GenBankmRNA	FY210802.1	-	1 - 2		Chr. 21 - 44934315 - 44939867 [+] on Build GRCh38	99
GenBankmRNA	FY212609.1	-	1 - 2		Chr. 21 - 44934315 - 44939873 [+] on Build GRCh38	99

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ITGB2 antisense RNA 1	ITGB2-AS1		-4.6kb	Sense	Chr. 21 - 44921035 - 44929680 on NCBI Build GRCh38
Downstream	family with sequence similarity 207 member A	FAM207A	C21orf70, PRED56	4.9kb	Sense	Chr. 21 - 44939697 - 44976989 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2100008395.hg.1
This assay targets the same location as HTA transcript cluster(s) TC21000539.hg.1

Set Membership:

Amplicon length between 86 and 100

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR21006502.hg.1	ENST00000397841.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21006502.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21006502.hg.1	TC21000539.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008395.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100156973.hg.1	TC2100008395.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100156973.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156973.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156973.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100156973.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156973.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156973.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	TC2100008395.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	ENST00000330551.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100156977.hg.1	NR_027129.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100156974.hg.1	TC2100008395.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100156974.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156974.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156974.hg.1	NR_027128.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100156974.hg.1	ENST00000397841.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156974.hg.1	ENST00000615847.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2100156974.hg.1	NR_027128.1	Refseq

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System Message

Genomic Map