Name: [Hs01120877_m1] [AP5M1]
Creator: Thermo Fisher Scientific
Keywords: [AP5M1] Assay, [adaptor related protein complex 5 mu 1 subunit] Assay

Assay Details

Gene Symbol: AP5M1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026895.1		1 - 2	499		88
GenBank mRNA	DB204683.1	-	1 - 2	361		88

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	N76959.1	-	1 - 2	133	Chr. 14 - 57269251 - 57280322 [+] on Build GRCh38	87
GenBankmRNA	DA826459.1	-	1 - 2	346	Chr. 14 - 57269042 - 57280413 [+] on Build GRCh38	88
GenBankmRNA	DA947146.1	-	1 - 2	315	Chr. 14 - 57269072 - 57280424 [+] on Build GRCh38	88
GenBankmRNA	DB173908.1	-	1 - 2	92	Chr. 14 - 57269295 - 57283024 [+] on Build GRCh38	88
GenBankmRNA	BG480802.1	-	1 - 2		Chr. 14 - 57269044 - 57282962 [+] on Build GRCh38	87
GenBankmRNA	DA468435.1	-	1 - 2	323	Chr. 14 - 57269065 - 57280421 [+] on Build GRCh38	88
GenBankmRNA	N76958.1	-	1 - 2	134	Chr. 14 - 57269251 - 57280341 [+] on Build GRCh38	87

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	exocyst complex component 5	EXOC5	HSEC10, PRO1912, SEC10, SEC10L1, SEC10P	-166.0	Anti-sense	Chr. 14 - 57202476 - 57268899 on NCBI Build GRCh38
Downstream	N(alpha)-acetyltransferase 30, NatC catalytic subunit	NAA30	C14orf35, MAK3, Mak3p, NAT12, NAT12P	110.1kb	Sense	Chr. 14 - 57390553 - 57412748 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1400007282.hg.1
This assay targets the same location as HTA transcript cluster(s) TC14000340.hg.1

Set Membership:

Amplicon length between 86 and 100

Homo sapiens

Probe spans exons

Gene Ontology Categories:

Function(s)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR14003635.hg.1	ENST00000261558.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14003635.hg.1	ENST00000431972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14003635.hg.1	ENST00000556723.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14003635.hg.1	NM_018229.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14003635.hg.1	NR_026895.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14003635.hg.1	TC14000340.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	ENST00000261558.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	ENST00000431972.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	ENST00000555448.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	ENST00000556723.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	NM_018229.3	Refseq
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	NR_026895.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	ENST00000261558.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	ENST00000431972.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	ENST00000555448.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	ENST00000556723.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	NM_018229.3	Refseq
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	NR_026895.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400150460.hg.1	TC1400007282.hg.1	Clariom D TC

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