Name: [Hs01393988_m1] [LOC285627]
Creator: Thermo Fisher Scientific
Keywords: [LOC285627] Assay, [uncharacterized LOC285627] Assay

Assay Details

Gene Symbol: LOC285627
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027110.1		2 - 3	271		70
GenBank mRNA	BC033376.1	-	2 - 3	271		70

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BG773523.1	-	2 - 3	275		Chr. 5 - 159458513 - 159466276 [-] on Build GRCh38	70

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC285626	LOC285626		-96.7kb	Anti-sense	Chr. 5 - 159331518 - 159362834 on NCBI Build GRCh38
Downstream	uncharacterized LOC101927766	LOC101927766		312.4kb	Sense	Chr. 5 - 159776772 - 159871384 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500012647.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001998.hg.1

Set Membership:

Amplicon length less than or equal to 70

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05027825.hg.1	TC05001998.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05027825.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05027825.hg.1	NR_027110.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05027826.hg.1	TC05001998.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05027826.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05027826.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500188228.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500188228.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500188228.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500188228.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500188228.hg.1	TC0500012647.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500188229.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500188229.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500188229.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500188229.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500188229.hg.1	TC0500012647.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	ENST00000518418.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	NR_027110.2	Refseq
Affymetrix Human Clariom D Assay	TC0500012647.hg.1	NR_027110.2	Refseq

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Genomic Map