Name: [Hs01592414_m1] [POPDC3]
Creator: Thermo Fisher Scientific
Keywords: [POPDC3] Assay, [popeye domain containing 3] Assay

Assay Details

Gene Symbol: POPDC3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024539.1		2 - 3	428		171
GenBank mRNA	AK225989.1	-	2 - 3	428		171

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BM800745.1	-	2 - 3	466	Chr. 6 - 105158372 - 105163765 [-] on Build GRCh38	171
GenBankmRNA	BU156328.1	-	1 - 2	223	Chr. 6 - 105158173 - 105162009 [-] on Build GRCh38	171
GenBankmRNA	BU627215.1	-	2 - 3		Chr. 6 - 105158280 - 105161971 [+] on Build GRCh38	171
GenBankmRNA	BP369262.1	-	2 - 3	428	Chr. 6 - 105158709 - 105176255 [-] on Build GRCh38	171
GenBankmRNA	CK005752.1	-	2 - 3	476	Chr. 6 - 105158642 - 105179940 [-] on Build GRCh38	171

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	BVES antisense RNA 1	BVES-AS1	C6orf112, bA99L11.2		Anti-sense	Chr. 6 - 105137687 - 105169945 on NCBI Build GRCh38
Downstream	prolyl endopeptidase	PREP	PE, PEP	115.4kb	Sense	Chr. 6 - 105277567 - 105403124 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600012709.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06001977.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000429112.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000429112.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000429112.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06024520.hg.1	TC06001977.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06024520.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024520.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024520.hg.1	NM_022361.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06024520.hg.1	NR_024539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06024526.hg.1	TC06001977.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06024526.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187669.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187669.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187669.hg.1	TC0600012709.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000429112.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000429112.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000429112.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	TC0600012709.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	ENST00000429112.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	ENST00000429112.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187662.hg.1	TC0600012709.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	ENST00000254765.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	ENST00000474760.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	ENST00000489134.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	NM_022361.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	NR_024539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187665.hg.1	TC0600012709.hg.1	Clariom D TC

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Genomic Map