Name: [Hs03666092_s1] [LINC00997]
Creator: Thermo Fisher Scientific
Keywords: [LINC00997] Assay, [long intergenic non-protein coding RNA 997] Assay

Assay Details

Gene Symbol: LINC00997
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_036501.1		1	1049		120
GenBank mRNA	AF143329.1	-	1	152		120

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX118682.1	-	1	141		Chr. 7 - 32759194 - 32759716 [+] on Build GRCh38	120

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 550b-2	MIR550B2		-26.1kb	Anti-sense	Chr. 7 - 32732981 - 32733077 on NCBI Build GRCh38
Downstream	DPY19L1 pseudogene 2	DPY19L1P2	THC1072510	12.1kb	Sense	Chr. 7 - 32826302 - 32838744 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700007126.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07000210.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15924960	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25623404	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25623405	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P05405083	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P05405082	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25623438	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P25623413	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_24_P913716	-	-
Agilent Human 1B Microarray G4111A	A_32_P457784	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT HG-U133+ PM Array Plate	232255_PM_at	-	-
Affymetrix HT HG-U133+ PM Array Plate	1560371_PM_at	-	-
Affymetrix HT HG-U133+ PM Array Plate	232256_PM_s_at	-	-
Affymetrix Human Transcriptome Array 2.0	TC0700011731.hg.1	ENST00000471553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700011731.hg.1	ENST00000471553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007126.hg.1	ENST00000609151.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007126.hg.1	ENST00000609151.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007126.hg.1	ENST00000628855.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07003310.hg.1	TC07000210.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07003310.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149602.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149602.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149602.hg.1	TC0700007126.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700149604.hg.1	ENST00000609151.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700149604.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149604.hg.1	ENST00000609151.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700149604.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149604.hg.1	TC0700007126.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700149606.hg.1	ENST00000628855.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700149606.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149606.hg.1	ENST00000628855.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700149606.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149606.hg.1	TC0700007126.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0700007126.hg.1	ENST00000609151.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007126.hg.1	ENST00000609151.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007126.hg.1	ENST00000628855.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	TC0700007126.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149603.hg.1	ENST00000609151.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700149603.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149603.hg.1	ENST00000609151.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700149603.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149603.hg.1	TC0700007126.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0700011731.hg.1	ENST00000471553.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700011731.hg.1	ENST00000471553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700149605.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149605.hg.1	NR_036501.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700149605.hg.1	TC0700007126.hg.1	Clariom D TC
Human Genome U133 Plus 2.0 Array	1560371_at	-	-
Human Genome U133 Plus 2.0 Array	232255_PM_at	-	-
Human Genome U133 Plus 2.0 Array	232256_s_at	-	-
Human Genome U133 Plus 2.0 Array	1560371_PM_at	-	-
Human Genome U133 Plus 2.0 Array	232255_at	-	-
Human Genome U133 Plus 2.0 Array	232256_PM_s_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232255_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	232256_s_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560371_at7	-	-
Human Genome U95 Set	47345_PM_r_at	-	-
Human Genome U95 Set	47345_r_at	-	-
Human Genome U133 Set	232255_PM_at	-	-
Human Genome U133 Set	232256_PM_s_at	-	-
Human Genome U133 Set	232256_s_at	-	-
Human Genome U133 Set	232255_at	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1751227	AK092714.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1751227	AK127989.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1751227	NR_036501.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1751227	AK092714.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1751227	AK127989.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1751227	NR_036501.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1751227	AK092714.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1751227	AK127989.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1751227	NR_036501.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1751227	AK092714.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1751227	AK127989.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1751227	NR_036501.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1751227	AK092714.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1751227	AK127989.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1751227	NR_036501.1	human_transcriptome

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Catalog #	4426961
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Genomic Map