GSN-AS1
Genomic Map
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| Gene Symbol: GSN-AS1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_103560.1 | 1 | 4669 | 71 | ||
| GenBank mRNA | AF220263.1 | - | 1 | 4649 | 71 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream |
RAB14, member RAS oncogene family |
RAB14 |
FBP, RAB-14 |
-78.7kb | Sense | Chr. 9 - 121178137 - 121202087 on NCBI Build GRCh38 |
| Downstream | uncharacterized LOC105376256 | LOC105376256 | 6.7kb | Sense | Chr. 9 - 121292216 - 121299157 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0900011399.hg.1Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Homo sapiens
1700
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_23_P367663 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_44k_23_P94656 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_44k_23_P367663 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 2802 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 42848 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 26491 | - | - |
| SurePrint G3 Human GE Microarray G4851A | ERCC-00109_120 | - | - |
| Whole Human Genome Oligo Microarray G4112A | A_23_P94656 | - | - |
| Agilent Whole Human Genome Microarray 4x44K G4112F | A_23_P94656 | - | - |
| Agilent Whole Human Genome Microarray 4x44K G4112F | A_23_P367663 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | XR_040686_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | XR_040687_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | XR_040688_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8163893 | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8163895 | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8163894 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8163892 | - | - |
| Affymetrix HT HG-U133+ PM Array Plate | 221072_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11762372_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11762372_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | ENST00000437135.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | ENST00000437135.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011399.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177775.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177775.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177775.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177775.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177775.hg.1 | TC0900011399.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0900177772.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177772.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177772.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177772.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177772.hg.1 | TC0900011399.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | ENST00000437135.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | ENST00000437135.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900011399.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177773.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177773.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177773.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177773.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177773.hg.1 | TC0900011399.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0900177774.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177774.hg.1 | ENST00000437135.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177774.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177774.hg.1 | ENST00000414544.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177774.hg.1 | ENST00000437135.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900177774.hg.1 | NR_103560.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900177774.hg.1 | TC0900011399.hg.1 | Clariom D TC |
| Human Genome U133 Plus 2.0 Array | 221072_at | - | - |
| Human Genome U133 Plus 2.0 Array | 221072_PM_at | - | - |
| Human Genome U133A 2.0 Array | 221072_at | - | - |
| Human Genome U133A 2.0 Array | 221072_PM_at | - | - |
| AffymetrixPathwork Diagnostics Pathchip | pw574799 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 221072_at1 | - | - |
| Human Genome U133 Set | 221072_PM_at | - | - |
| Human Genome U133 Set | 221072_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 116837 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_1750173 | AF220263.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1750173 | AF220263.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1750173 | AF220263.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1750173 | AF220263.1 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1750173 | AF220263.1 | human_transcriptome |
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