Name: [Hs03681298_m1] [CLCA4]
Creator: Thermo Fisher Scientific
Keywords: [CLCA4] Assay, [chloride channel accessory 4] Assay

Assay Details

Gene Symbol: CLCA4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024602.1		3 - 4	496		120
GenBank mRNA	AK307785.1	-	3 - 4	441		121

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DC335274.1	-	3 - 4	320	Chr. 1 - 86547252 - 86565892 [+] on Build GRCh38	120
GenBankmRNA	DC341341.1	-	3 - 4	334	Chr. 1 - 86547240 - 86565878 [+] on Build GRCh38	120
GenBankmRNA	DC341211.1	-	3 - 4	401	Chr. 1 - 86547172 - 86565453 [+] on Build GRCh38	120
GenBankmRNA	DB087913.1	-	3 - 4	433	Chr. 1 - 86549434 - 86565392 [+] on Build GRCh38	120
GenBankmRNA	DC316388.1	-	3 - 4	442	Chr. 1 - 86547132 - 86565408 [+] on Build GRCh38	121
GenBankmRNA	DC341240.1	-	3 - 4	372	Chr. 1 - 86547201 - 86565453 [+] on Build GRCh38	120

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chloride channel accessory 1	CLCA1	CACC, CACC1, CLCRG1, CaCC-1, GOB5, hCLCA1, hCaCC-1	-59.9kb	Sense	Chr. 1 - 86468843 - 86500294 on NCBI Build GRCh38
Downstream	chloride channel accessory 3, pseudogene	CLCA3P	CLCA3	68.8kb	Sense	Chr. 1 - 86634276 - 86655376 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100008924.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000823.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01013105.hg.1	TC01000823.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01013105.hg.1	ENST00000370563.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01013105.hg.1	NM_012128.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01013105.hg.1	NR_024602.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100163669.hg.1	ENST00000370563.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100163669.hg.1	NM_012128.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100163669.hg.1	NR_024602.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100163669.hg.1	ENST00000370563.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100163669.hg.1	NM_012128.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100163669.hg.1	NR_024602.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100163669.hg.1	TC0100008924.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map