Name: [Hs03681315_g1] [CLCA3P]
Creator: Thermo Fisher Scientific
Keywords: [CLCA3P] Assay, [chloride channel accessory 3, pseudogene] Assay

Assay Details

Gene Symbol: CLCA3P
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024604.1		9 - 10	1441		91
GenBank mRNA	AF043976.1	-	9 - 10	1441		91

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chloride channel accessory 4	CLCA4	CaCC, CaCC2	-66.4kb	Sense	Chr. 1 - 86547076 - 86580758 on NCBI Build GRCh38
Downstream	uncharacterized LOC105378828	LOC105378828		56.1kb	Anti-sense	Chr. 1 - 86571181 - 86704493 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100008925.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000825.hg.1

Set Membership:

Amplicon length between 86 and 100

Detect Genomic DNA

Homo sapiens

Probe spans exons

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01013132.hg.1	TC01000825.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01013132.hg.1	ENST00000466454.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01013132.hg.1	NR_024604.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	ENST00000284054.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	ENST00000466454.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	ENST00000490028.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	NR_024604.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	ENST00000284054.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	ENST00000466454.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	ENST00000490028.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	NR_024604.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100163694.hg.1	TC0100008925.hg.1	Clariom D TC

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Catalog #	4426961
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Genomic Map