Name: [Hs03681770_sH] [LOC389033]
Creator: Thermo Fisher Scientific
Keywords: [LOC389033] Assay, [placenta specific 9 pseudogene] Assay

Assay Details

Gene Symbol: LOC389033
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026740.1		3	349		68
GenBank mRNA	AI161103.1	-	1			68
GenBank mRNA	BF592795.1	-	1			68

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AA905960.1	-	1			Chr. 2 - 129922863 - 129934270 [+] on Build GRCh38	68
GenBankmRNA	HY354981.1	-	1			Chr. 2 - 129922863 - 129923849 [+] on Build GRCh38	68

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC151121	LOC151121		-649.0kb	Sense	Chr. 2 - 129242173 - 129273891 on NCBI Build GRCh38
Downstream	uncharacterized LOC101927924	LOC101927924		178.0	Anti-sense	Chr. 2 - 129923177 - 129946703 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200014240.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02002299.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human CGH Microarray 4x180K	153637	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	512865	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	272062	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	791605	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	139974	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	214508	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	316678	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	103487	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	61652	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	49721	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	326965	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	347102	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	111497	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3283601	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	6807	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	54166	-	-
Agilent Human Genome CGH + SNP Microarray	A_18_P13397670	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P00468206	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3283601	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3283601	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01478188	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21593968	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15321933	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15321952	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21593982	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21593953	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21593971	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01478186	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01478187	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21593953	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01478186	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15321933	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21593971	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01478187	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15321952	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21593968	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21593982	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01478188	-	-
Whole Human Genome Oligo Microarray G4112A	A_32_P230736	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478183	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478186	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478160	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15321884	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478170	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478188	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15321926	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478152	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15321902	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478179	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478144	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478155	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15321886	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15321880	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15321889	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478146	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478174	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478165	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478175	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478172	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478167	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478157	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478162	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478187	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01478150	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P00468206	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_18_P13393244	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02036897.hg.1	TC02002299.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02036897.hg.1	ENST00000433290.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02036897.hg.1	NR_026740.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02036896.hg.1	TC02002299.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02036896.hg.1	ENST00000433290.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02036896.hg.1	NR_026740.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	ENST00000440031.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	ENST00000440031.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	NR_026740.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	NR_026740.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200014240.hg.1	NR_026740.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02036895.hg.1	TC02002299.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02036895.hg.1	ENST00000433290.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02036895.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200203931.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203931.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203931.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200203931.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203931.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203931.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200203931.hg.1	TC0200014240.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	ENST00000440031.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	ENST00000440031.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200203933.hg.1	TC0200014240.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200203939.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203939.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200203939.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200203939.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200203939.hg.1	TC0200014240.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	ENST00000397540.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	ENST00000433290.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	ENST00000440031.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	ENST00000440031.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	NR_026740.1	Refseq
Affymetrix Human Clariom D Assay	TC0200014240.hg.1	NR_026740.1	Refseq

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A014325	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A014325	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1679632	NR_026740.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1679632	AI161103.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1679632	NR_026740.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1679632	AI161103.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1679632	NR_026740.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1679632	AI161103.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1679632	NR_026740.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1679632	AI161103.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1679632	NR_026740.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1679632	AI161103.1	human_transcriptome

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