Name: [Hs03872434_m1] [LINC01231]
Creator: Thermo Fisher Scientific
Keywords: [LINC01231] Assay, [long intergenic non-protein coding RNA 1231] Assay

Assay Details

Gene Symbol: LINC01231
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_121585.1		1 - 2	303		68
GenBank mRNA	BC041456.1	-	1 - 2	303		68

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI756497.1	-	1 - 2	303		Chr. 9 - 3181589 - 3198525 [+] on Build GRCh38	68

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	pumilio RNA binding family member 3	PUM3	HA-8, HLA-HA8, KIAA0020, PEN, PUF-A, PUF6, XTP5	-337.5kb	Anti-sense	Chr. 9 - 2804152 - 2844130 on NCBI Build GRCh38
Downstream	regulatory factor X3	RFX3		31.3kb	Anti-sense	Chr. 9 - 3218297 - 3526001 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900006491.hg.1

Set Membership:

Amplicon length less than or equal to 70

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900144584.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900144584.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900144584.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900144584.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900144584.hg.1	TC0900006491.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	TC0900006491.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900144582.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900144582.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900144582.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900144582.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900144582.hg.1	TC0900006491.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900144583.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900144583.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900144583.hg.1	ENST00000452746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900144583.hg.1	NR_121585.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900144583.hg.1	TC0900006491.hg.1	Clariom D TC

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System Message

Genomic Map