LOC100505782
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC100505782 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_040111.1 | 3 | 2053 | 104 | ||
| GenBank mRNA | BC039320.1 | - | 3 | 2053 | 104 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | keratin 31 | KRT31 |
HA1, Ha-1, KRTHA1, hHa1 |
-14.8kb | Anti-sense | Chr. 17 - 41393724 - 41397592 on NCBI Build GRCh38 |
| Downstream | keratin 37 | KRT37 |
HA7, K37, KRTHA7 |
8.0kb | Anti-sense | Chr. 17 - 41420557 - 41424570 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1700007834.hg.1This assay targets the same location as HTA transcript cluster(s) TC17000511.hg.1
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Homo sapiens
1700
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322484 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322488 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322470 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322472 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322475 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322476 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322473 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322477 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322468 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322474 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322489 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P30894507 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322480 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10322482 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 955372 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 218928 | BC017907.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 218928 | BC033168.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 218928 | BC103755.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 218928 | NM_057179.1 | refseq_mrna_human_NM |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 520964 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 174661 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 729024 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 105504 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 104716 | M11353.1 | genbank_mrna_human |
| Agilent Human Genome CGH Microarray 105A (G4412A) | A_16_P03245119 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P03245119 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P40817537 | - | - |
| Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522 | 29905 | - | - |
| Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015 | 33095 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P40817536 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P20647431 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P03245123 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P03245130 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P03245119 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P20647464 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_18_P20863904 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P20647443 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P40817537 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P03245134 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P03245110 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P03245130 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P40817537 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR17006113.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006113.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006113.hg.1 | TC17000511.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006110.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006110.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006110.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006110.hg.1 | TC17000511.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006111.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006111.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006111.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17006111.hg.1 | TC17000511.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007834.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700156957.hg.1 | TC1700007834.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700156959.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156959.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156959.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700156959.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156959.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156959.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700156959.hg.1 | TC1700007834.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700156956.hg.1 | TC1700007834.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000430006.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | ENST00000432258.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | NR_040111.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700007834.hg.1 | NR_040111.1 | Refseq |
| Human Genome U133 Plus 2.0 Array | 1557068_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1557068_PM_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557068_at6 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A009514 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A009514 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 151325 | - | - |
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