Assay Details

Gene Symbol: MIR409
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_029975.1		1	41		55

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 541	MIR541	MIRN541, hsa-mir-541, mir-541	-722.0	Sense	Chr. 14 - 101064495 - 101064578 on NCBI Build GRCh38
Downstream	microRNA 412	MIR412	MIRN412, hsa-mir-412, mir-412	69.0	Sense	Chr. 14 - 101065447 - 101065537 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1400008305.hg.1
This assay targets the same location as HTA transcript cluster(s) TC14000759.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09518031	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09518039	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29980351	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29980348	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09518034	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09518036	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29980348	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09518039	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09518031	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09518036	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09518034	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29980351	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR14008226.hg.1	ENST00000362237.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14008226.hg.1	NR_029975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14008226.hg.1	TC14000759.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1400008305.hg.1	ENST00000362237.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400008305.hg.1	ENST00000362237.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400008305.hg.1	NR_029975.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400159111.hg.1	ENST00000362237.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159111.hg.1	NR_029975.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400159111.hg.1	ENST00000362237.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159111.hg.1	NR_029975.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400159111.hg.1	TC1400008305.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1400008305.hg.1	ENST00000362237.2	Ensembl
Affymetrix Human Clariom D Assay	TC1400008305.hg.1	ENST00000362237.2	Ensembl
Affymetrix Human Clariom D Assay	TC1400008305.hg.1	NR_029975.1	Refseq

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Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3309945	NR_029975.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3309945	NR_029975.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3309945	NR_029975.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3309945	NR_029975.1	human_transcriptome

System Message

Genomic Map