Assay Details

Gene Symbol: MIR3139
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_036091.1		1	33		71

Gene Symbol: GAB1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_017007969.1	XP_016863458.1	1	681		71

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ubiquitin specific peptidase 38	USP38	HP43.8KD	-119.6kb	Sense	Chr. 4 - 143184917 - 143223874 on NCBI Build GRCh38
Downstream	ribosomal protein SA pseudogene 36	RPSAP36	RPSA_14_525	81.4kb	Sense	Chr. 4 - 143424974 - 143425984 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0400008880.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_017007969.1 transcripts.

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0400008880.hg.1	ENST00000579145.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400008880.hg.1	NR_036091.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400160963.hg.1	ENST00000579145.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400160963.hg.1	NR_036091.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400160963.hg.1	ENST00000579145.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400160963.hg.1	NR_036091.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400160963.hg.1	TC0400008880.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0400008880.hg.1	ENST00000579145.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400008880.hg.1	NR_036091.1	Refseq

System Message

Genomic Map