Name: [Hs04232136_s1] [LOC100287846]
Creator: Thermo Fisher Scientific
Keywords: [LOC100287846] Assay, [patched 1 pseudogene] Assay

Assay Details

Gene Symbol: LOC100287846
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037168.1		1	650		65

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	POTE ankyrin domain family member A-like	LOC105375817		-20.5kb	Anti-sense	Chr. 8 - 47100920 - 47123457 on NCBI Build GRCh38
Downstream	scaffolding protein involved in DNA repair	SPIDR	KIAA0146	68.1kb	Sense	Chr. 8 - 47260878 - 47736001 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800007527.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08000342.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	ENST00000521874.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08004989.hg.1	TC08000342.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08004989.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08004989.hg.1	NR_037168.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08004988.hg.1	TC08000342.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08004988.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151994.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151994.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151994.hg.1	TC0800007527.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800151997.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151997.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151997.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151997.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151997.hg.1	TC0800007527.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800151996.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151996.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151996.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151996.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151996.hg.1	TC0800007527.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800151992.hg.1	ENST00000521874.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151992.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151992.hg.1	ENST00000521874.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151992.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151992.hg.1	TC0800007527.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800151995.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151995.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151995.hg.1	TC0800007527.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800151993.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151993.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151993.hg.1	TC0800007527.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800151998.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151998.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151998.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151998.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151998.hg.1	TC0800007527.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	ENST00000521874.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	ENST00000528139.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	NR_037168.2	Refseq
Affymetrix Human Clariom D Assay	TC0800007527.hg.1	NR_037168.2	Refseq
Human Genome U95 Set	63707_r_at	-	-
Human Genome U95 Set	63707_PM_r_at	-	-

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Genomic Map