COL6A4P1
Genomic Map
Back To TopAssay Details
| Gene Symbol: COL6A4P1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_027927.1 | 3 - 4 | 1440 | 94 | ||
| GenBank mRNA | AB299979.1 | - | 3 - 4 | 1440 | 94 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream |
rabenosyn, RAB effector |
RBSN |
Rabenosyn-5, ZFYVE20 |
-70.8kb | Sense | Chr. 3 - 15070069 - 15099163 on NCBI Build GRCh38 |
| Downstream | calpain 7 | CAPN7 |
CALPAIN7, PALBH |
30.9kb | Anti-sense | Chr. 3 - 15206226 - 15252916 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0300010395.hg.1This assay targets the same location as HTA transcript cluster(s) TC03001205.hg.1
Set Membership: |
Amplicon length between 86 and 100
Homo sapiens
Probe spans exons
|
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR03020648.hg.1 | TC03001205.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR03020648.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR03020648.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000491915.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000491915.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000491915.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | ENST00000491915.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | ENST00000491915.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300175777.hg.1 | TC0300010395.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0300175776.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175776.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175776.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300175776.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175776.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300175776.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300175776.hg.1 | TC0300010395.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000446690.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000487147.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000491915.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000491915.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000491915.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | ENST00000508169.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | NR_027927.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0300010395.hg.1 | NR_027927.1 | Refseq |
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